DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and SRGAP1

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_065813.1 Gene:SRGAP1 / 57522 HGNCID:17382 Length:1085 Species:Homo sapiens


Alignment Length:734 Identity:135/734 - (18%)
Similarity:230/734 - (31%) Gaps:282/734 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQGT--------- 122
            |||.| |:........|...|||.. .|.:..:|:.|.:...|::|.||:..|..|         
Human     8 KKDKE-IIAEYESQVKEIRAQLVEQ-QKCLEQQTEMRVQLLQDLQDFFRKKAEIETEYSRNLEKL 70

  Fly   123 ----VTRSRSA-------------TP-------------DSLDSLQIDEAWTNNSLPTFVNV--- 154
                :.::||.             :|             :|.|...:.:.:.||.:..|:.:   
Human    71 AERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDIYLNNVIMRFMQISED 135

  Fly   155 ----YEKNTETAIQCVEQ----SNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADG 211
                ::|:.|.|.|..|.    .||:|....            || .::....:..:..|..|:.
Human   136 STRMFKKSKEIAFQLHEDLMKVLNELYTVMK------------TY-HMYHAESISAESKLKEAEK 187

  Fly   212 VELLGYSRIGTIQF--------PRNRSVSDPFCSIGRSKESR----SENDARSQKKKSSEVLS-- 262
            .|.....|.|...|        .|..||.    .|.:.||.|    |||..:|.|.::..:|:  
Human   188 QEEKQIGRSGDPVFHIRLEERHQRRSSVK----KIEKMKEKRQAKYSENKLKSIKARNEYLLTLE 248

  Fly   263 --------------------------ASENECGR-LLPMPYNV---------------------- 278
                                      ||.|...| .|...||:                      
Human   249 ATNASVFKYYIHDLSDLIDCCDLGYHASLNRALRTYLSAEYNLETSRHEGLDIIENAVDNLEPRS 313

  Fly   279 ----------------LSFE-------SICRDSS----------------------SLDSCEVLD 298
                            :.||       .:|:.|:                      .:::.||..
Human   314 DKQRFMEMYPAAFCPPMKFEFQSHMGDEVCQVSAQQPVQAELMLRYQQLQSRLATLKIENEEVKK 378

  Fly   299 TCDIPSTLFTDVVLISETDMKRL---------------QTIL----------------------- 325
            |.:.......|:|.|.:.|:...               :|.|                       
Human   379 TTEATLQTIQDMVTIEDYDVSECFQHSRSTESVKSTVSETYLSKPSIAKRRANQQETEQFYFMKL 443

  Fly   326 --WLELATIFDRNKVSLD----------------------KRKPFKRRRKE-----EGNLFGVSI 361
              :||.:.:..:.:...|                      ..||.|.|:..     ...||...:
Human   444 REYLEGSNLITKLQAKHDLLQRTLGEGHRAEYMTTRPPNVPPKPQKHRKSRPRSQYNTKLFNGDL 508

  Fly   362 NALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFY--QN 424
            ...::...||       :||.:|..|..:...|.:.:|:.|:.|    :::..|:::::|.  :|
Human   509 ETFVKDSGQV-------IPLIVESCIRFINLYGLQHQGIFRVSG----SQVEVNDIKNSFERGEN 562

  Fly   425 P--DNLDNLFRTATVHELSS---LLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQMNALSI--L 482
            |  |:..|       |:::|   :||.:.|.|..||...|.......|..:.::.: .||.|  |
Human   563 PLADDQSN-------HDINSVAGVLKLYFRGLENPLFPKERFNDLISCIRIDNLYE-RALHIRKL 619

  Fly   483 CHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFP-PRYIHPSDNNSIAEQVRM 546
            ...||......:|.|.:|.|.:....|.|.|:.:|:|....|::.| |         .|.:||..
Human   620 LLTLPRSVLIVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMPVP---------EIQDQVSC 675

  Fly   547 AAQCCRLTNILILRGEKLF 565
            .|....:...:|:..|.:|
Human   676 QAHVNEIIKTIIIHHETIF 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 53/220 (24%)
SRGAP1NP_065813.1 F-BAR_srGAP1 26..278 CDD:153367 51/269 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..496 4/20 (20%)
RhoGAP_srGAP 502..689 CDD:239848 51/214 (24%)
SH3_srGAP1-3 747..799 CDD:212888
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 808..954
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 997..1038
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1051..1085
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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