DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conu and AgaP_AGAP000504

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_001688298.2 Gene:AgaP_AGAP000504 / 5666818 VectorBaseID:AGAP000504 Length:2132 Species:Anopheles gambiae


Alignment Length:654 Identity:118/654 - (18%)
Similarity:207/654 - (31%) Gaps:196/654 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DQDFSEFLNEYYLQSNSQSIEPEASYEDGEMEAEWLVSAGYP-----------ELTKPFEQGLEV 65
            |.|.:|..:.....|:..:...|.:...|:::.:.|.||..|           .|.:.|:...::
Mosquito   880 DTDPTEPASSTVELSSGLATTDEGAPASGKLQPQQLKSAYRPWRRPRLTTDIQPLRRLFDPEADL 944

  Fly    66 SKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKP------DIRDVFREFDEQGTVT 124
            :...|.|||.|  :|...|.....|:       |....|.|.|      |..|.....:::|...
Mosquito   945 AVPALPPILET--EPFTSASASKKRS-------RPLPTPPRLPNDDDDADDDDADDADEDEGGAA 1000

  Fly   125 RSRSATP-------------------------------DSLDSLQIDEAWTNNSLPT----FVNV 154
            .:|.|.|                               .||.:|.:....|...:.|    |...
Mosquito  1001 GTRPARPARAVKGRSASLVTTTPFGSATGGGHRLFGAAGSLGNLHVITTTTAGGIVTRNYFFAQR 1065

  Fly   155 YEKNTETAIQCV---------------------------EQSNEIYLKQNLRRTPSAPPKSGTYA 192
            :.:.....:.||                           :|:.    .|.:....|...:.|:..
Mosquito  1066 FARLLYCCVLCVCVLFCAVVVVVVGYFLPCFLVCVGRGGQQAE----PQRIAAQTSVQVQGGSVG 1126

  Fly   193 DIFRGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKS 257
            ....|......:|..|.....|...|..|.....::|......||        |..|:..|.   
Mosquito  1127 GSNSGDDYSPVLPAKSQRKYALGSRSPSGQSPVTKSRKTPQAGCS--------SPTDSADQS--- 1180

  Fly   258 SEVLSASENECGRLLPMPYNVLSFESI----------CRDSSSLDSCEVLDTCDIPSTLFTDVVL 312
               :::|.|:.....| |::....:..          .:|||..:|       ..|.:.....::
Mosquito  1181 ---IASSSNQPAYHQP-PHHYQQQQQQQQHHHHHHHGAKDSSDRES-------GSPKSKTWKGIM 1234

  Fly   313 ISETDMKRLQ-------------TILWLELATIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINAL 364
            .::  .:::|             |.|.|||..:..||:                           
Mosquito  1235 AAK--FRKMQWQPAAADLPDNAPTGLPLELCPVSSRNR--------------------------- 1270

  Fly   365 IRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQK----TELLYNELESTFYQNP 425
                         .:||.:||.|..:..:|....|:.||.|:...    ||.:...|:.....:|
Mosquito  1271 -------------FLPLVVEKCISVVESKGLLVVGIYRIPGNTAAIAALTETINRGLDEVALNDP 1322

  Fly   426 DNLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQMNALSILCHLLPPEN 490
                   |...|:.:|||||.:.|.||||:|.:.:.:.|..........::.||..:...:|..|
Mosquito  1323 -------RWDDVNVVSSLLKAFFRNLPQPVLPDAMYRGFISADQQSGQRRLIALRQMLERIPRMN 1380

  Fly   491 RNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCCRLTN 555
            ..||:.|:....::....:.|.|:..|:|.:..||      :....::||...|......|::..
Mosquito  1381 YETLKYLMRHLVLVTAHSEANLMDPRNLAIVFGPS------VVRCTSDSIQSAVMDMRHQCQIIE 1439

  Fly   556 ILIL 559
            :||:
Mosquito  1440 VLII 1443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 47/208 (23%)
AgaP_AGAP000504XP_001688298.2 PDZ_signaling 10..114 CDD:238492
RhoGAP 1257..1449 CDD:295372 53/240 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.