DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and myo9b

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_005171391.1 Gene:myo9b / 560956 ZFINID:ZDB-GENE-030131-938 Length:1974 Species:Danio rerio


Alignment Length:637 Identity:144/637 - (22%)
Similarity:252/637 - (39%) Gaps:173/637 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LTKPFEQGLEVSKKDLE----------PILTTLSKPHA--EAIVQLV------------------ 89
            |.:| ..||:|...||.          ||     .|.|  ::|.|:|                  
Zfish  1248 LARP-RSGLKVDDLDLSDSAYWSFPLPPI-----SPAAPNQSITQVVVEAVMQSSVESDGCFPFS 1306

  Fly    90 -RTLNKTVRVRTKSRPKRKPDIRDVF--REFDEQGTVTR-------------SRSATPDSLDSLQ 138
             |:.::.| :.....|:||..:: .|  |...:.||:|.             :.|.:|.:.:|..
Zfish  1307 NRSPSEEV-IAPSITPERKGFLK-FFKKRSTPQDGTITMVKTLAEKEELASGNHSNSPRTKNSGT 1369

  Fly   139 IDEAWTNNSLPTFVNVYEKNTETAIQC-------VEQSNEIYLKQNLRRTPSAPPKSGTYADIFR 196
            ...|..|   ||.  ...:.|.|.:|.       :..:||:                 .:.|.|.
Zfish  1370 YPGAHRN---PTI--KISRATRTQVQWNASLDREITDTNEL-----------------RHLDEFL 1412

  Fly   197 GSQVRCDIPLYSADGVELLGYSRIGTIQFPRN----RSVSDPFCSIGRS---KESRSENDARSQK 254
            |:|:. |:...|.:..|........|.||...    .|:|:|  |||..   ...:.:.|:.:.|
Zfish  1413 GNQMN-DLSTRSKELSETEKIFFTATTQFRETIKSMYSISNP--SIGYKVLMSGYQKKVDSLAGK 1474

  Fly   255 KKSSEVLSASENECGRLLPMPYNVLSFESIC-----RDSSSLDS--CEVLDT----------CDI 302
            ||:|||            |:..|:  |:|:.     .:...:|:  |:|.:.          .|.
Zfish  1475 KKASEV------------PLVVNL--FQSVLDGFIRGELKRIDAEPCKVKERNRRKSKREAHPDS 1525

  Fly   303 P-STLFT--DVVLISETDMKRLQTILW-LELATIFDR----------NKVSLDKRKPFKRRRKEE 353
            | ..||:  .|.::...|  :..:.:| :|.|.:...          :|::::....:.|:::.|
Zfish  1526 PLGHLFSTYQVTIMQSCD--QCTSYIWGMEKAFMCSSCKMVCHKKCLSKITINCTAHYIRKKEGE 1588

  Fly   354 GNL-FGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNEL 417
            ..| |||.:.||:.      ..||  ||..||:::..:...|...||:.|..|...:.:.|:.:|
Zfish  1589 HTLHFGVPLCALVH------AADS--VPFVLEQMLVHVEMNGLYTEGIYRKSGAACRAKELHQKL 1645

  Fly   418 ESTFYQNPD--NLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLP-SIDQMNAL 479
            |    ::|.  :||    |..:|.::.|:|:||||||.||:|..|...|.....|| :.:::.|:
Zfish  1646 E----KDPHTVSLD----TYPIHTVTGLVKQWLRELPDPLMTYSLYNDFLYAVDLPETSERLRAV 1702

  Fly   480 SILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQV 544
            ......||..|.:||..|:.....:...::.|:|:..::|.:.||.:.  |....||.....:.:
Zfish  1703 YRKLEELPSSNISTLERLIFHLVKVAKEEEHNRMSADSLAIVFAPCIL--RCPDSSDPLLSMKDI 1765

  Fly   545 RMAAQCCRLTNILILR-----GEKLFQVPNNLIVESQKTMMGKKGWHRHRNS 591
            .....|   ..|||..     .:|:.::..   :||.:.|..|:...|.:|:
Zfish  1766 NKTTLC---VEILIKEQIRRYNQKMEEIQQ---LESAEAMAVKELQLRRQNT 1811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 61/228 (27%)
myo9bXP_005171391.1 UBQ 13..110 CDD:294102
MYSc 147..974 CDD:214580
MYSc_Myo9 159..965 CDD:276836
C1 1529..1577 CDD:237996 8/49 (16%)
RhoGAP 1593..1778 CDD:295372 58/205 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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