DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap27

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001192165.1 Gene:Arhgap27 / 544817 MGIID:1916903 Length:869 Species:Mus musculus


Alignment Length:527 Identity:111/527 - (21%)
Similarity:198/527 - (37%) Gaps:115/527 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEFLNEYYLQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKP 80
            ::|..|.:::...|..:| ..|...:...:|.:    |::..|..:.:..|.:|.:      :..
Mouse   413 NQFTQEQWVRLEDQHGKP-YFYNPEDSSVQWEL----PQVPIPAPRSVRKSSQDSD------TPA 466

  Fly    81 HAEAIVQLVRTLNKT-VRVRTKSRPKRKPDIRDVFREFDEQGTVTRSRSATPDSLDSLQIDEAWT 144
            .|....:.::||:|. |..|||:..|.|                         .|.......:||
Mouse   467 QASPPEEKIKTLDKAGVLHRTKTVDKGK-------------------------RLRKKHWSTSWT 506

  Fly   145 NNSLPTFVNVYEKNTETAI-----QCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDI 204
              .|...|..:.|:::|:.     |..:.|...|..:....:.|..||.        .|..:..:
Mouse   507 --VLEGGVLTFFKDSKTSAAGGLRQPSKLSTPEYTVELKGASLSWAPKD--------KSSKKNVL 561

  Fly   205 PLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENECG 269
            .|.|.||.|.|.......|....::::::....:........|.:..|....|||.|.:...|..
Mouse   562 ELRSRDGSEYLIQHDSEAIISTWHKAIAEGISELSADLLQGEEGEPSSADFGSSERLGSWREEDV 626

  Fly   270 RLLPMPYNVLSFESICRDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQTILWLELATIFD 334
            |           ::....|.|            |..|        |:|:.|:             
Mouse   627 R-----------QNAASPSLS------------PGGL--------ESDLSRV------------- 647

  Fly   335 RNKV-SLDKRKPFKRRRKEEG----NLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRG 394
            |:|: ...:|:|..:..:::|    .:||.::..|..|::       |.||.|:::.|..:..||
Mouse   648 RHKLRKFLQRRPTLQSLRDKGYIKDQVFGCALAQLCERER-------SPVPRFVQQCIRTVEARG 705

  Fly   395 SREEGLLRIGGHKQKTELLYNELESTFYQNPDNLD-NLFRTATVHELSSLLKRWLRELPQPLLTN 458
            ...:||.||.|:....:.|..:::     :.:.|| :..|...||.::..||.:.||||:||...
Mouse   706 LDIDGLYRISGNLATIQKLRYKVD-----HDERLDLDDGRWEDVHVITGALKLFFRELPEPLFPF 765

  Fly   459 ELIQLFYQCHTLPSIDQMN-ALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIM 522
            .....|.....|....|.: .:..|...||..|::|||.|:.....:|...:.|:|.|.|||.:.
Mouse   766 SHFHQFIAAIKLQDPAQRSRCVRDLVRTLPAPNQDTLRLLIQHLCRVIEHGEQNRMTVQNVAIVF 830

  Fly   523 APSMFPP 529
            .|::..|
Mouse   831 GPTLLRP 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 50/176 (28%)
Arhgap27NP_001192165.1 SH3_ARHGAP27 10..66 CDD:213002
PRK12323 <68..249 CDD:237057
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..134
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..300
PRP40 241..>328 CDD:227435
WW 248..278 CDD:395320
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..401
WW 418..445 CDD:395320 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..477 5/43 (12%)
PH_ARHGAP9-like 480..594 CDD:270053 28/148 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 623..642 6/49 (12%)
RhoGAP_ARHGAP27_15_12_9 675..861 CDD:239868 50/175 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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