DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and arhgap29b

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_005163369.1 Gene:arhgap29b / 378998 ZFINID:ZDB-GENE-031010-44 Length:1338 Species:Danio rerio


Alignment Length:844 Identity:162/844 - (19%)
Similarity:294/844 - (34%) Gaps:293/844 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SDDQDF--------SEFLNEYYLQSNSQSIEPEASYEDG------------------EMEAEWLV 48
            :..|||        |.|.||  ::.|...::..|:.:..                  |::.:|  
Zfish   284 ASQQDFMPFRDIYVSAFKNE--IEYNHVLLQTAAALQTNKFTQPLLARKNDLDKQRKEIKEQW-- 344

  Fly    49 SAGYPELTKPFEQGLEVSK---------KDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRP 104
               ..||.|..|....:.|         ::.|...::.|:...|......|||.|..||..::..
Zfish   345 ---QRELKKMNESESALKKARLLKMQKREEYEKARSSTSRTEEEQPAAGGRTLEKKRRVEEEALQ 406

  Fly   105 K------------------------RKPDIRDVFREFDEQGTVTRSRSATPDSLDSLQIDEAWTN 145
            |                        .|.:|....|:...|..:| .::.|   ::..|:.:|.| 
Zfish   407 KAEEAQEQYKACVADLEAKKVSLSNAKSEILAQIRKLVFQCDLT-LKAVT---VNWFQMQQAQT- 466

  Fly   146 NSLPTFVNVYEKNTETA------------IQCVEQSNEIYLKQNLRRTPSAPPKSG--------- 189
              :|..|| |:..:|.|            ::.:.: ..::| ::|.:..:|..|:|         
Zfish   467 --MPLSVN-YQALSEQAKKYEPGQRYSEFVRSLPK-ERVWL-ESLSQDITASSKTGMSLHKRSQN 526

  Fly   190 ----TYADIFRGSQVRCDIPLYSADGVELLGYSRIGTIQ-----FPRNRSVSDPFCSIGRSKESR 245
                ::.::.:||....|  .:|||.||       |.:|     ....||.|.....:.|::.|:
Zfish   527 STRSSHGNLSQGSATSMD--NHSADEVE-------GNMQPCKAKIAERRSNSSIDMQVPRTQGSQ 582

  Fly   246 ----------------SENDARSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSC 294
                            ||:...|.:.:|.:..:||..:..|.||.          ...:.::.|.
Zfish   583 RAWSSGSAGGGGMCSDSESAGGSSESRSMDSPTASPGDFKRRLPR----------TPSTGTMSSA 637

  Fly   295 EVLDTCDIPS---TLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKRR------- 349
            :.||..:.||   |..:::|:.:.:.....:.....:.|......|:    |.|.|.|       
Zfish   638 DDLDEREPPSPSDTGLSEMVMETASSPGPFRNAQMSKAAHTHKLRKL----RAPSKCRECDSLVV 698

  Fly   350 ---------------------------RKEEG--NLFGVSINALIRRDQQVTGTDSSLVPLFLEK 385
                                       :|.:|  :|||:..       .||.......:|..::|
Zfish   699 FHGAECEECSLACHKKCLETLAIQCGHKKLQGRLHLFGIDF-------AQVVKNSPDGIPFIIKK 756

  Fly   386 LIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTATV--HELSSLLKRWL 448
            ...|:..|....:|:.|:.|.|.:.|.|....|        |..:|...:.:  |::|::||.:|
Zfish   757 CTSEIESRALTIKGIYRVNGAKSRVEKLCQAFE--------NGKDLVELSDLHPHDISNVLKLYL 813

  Fly   449 RELPQPLLT----NELIQLFYQCHTLPSIDQMNALSI-------------------LCHLLPPEN 490
            |:||:||:.    |::|.|..:...:...|.....|.                   |...||..:
Zfish   814 RQLPEPLILYRYYNDVIGLAKETQNMDKTDSAKEKSAGEQLGLSTELKRVLFKVRDLLRQLPAPH 878

  Fly   491 RNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDN-NSIAEQVRMAAQCCRLT 554
            ..||:.|::..:.:....:.|||...|:..|..|::..||::....: :|:.:....|    |:.
Zfish   879 YKTLQFLVTHLHRVSEQAEENKMTASNLGIIFGPTLIKPRHLEAEVSLSSLVDYPHQA----RMV 939

  Fly   555 NILILRGEKLFQVP-----------------------------------------------NNLI 572
            .:||...:.:|.||                                               :::|
Zfish   940 ELLIKHHQMIFDVPLSPMSPTSPTVSQASFGSSIQDKESKLSRHSRSLMDIKESAKLYKRHSSVI 1004

  Fly   573 VESQKTMMGKK---GWHRHRNSNEITAKPSGKASNV-GVG---HDST-VINK--YSTNLKHLHP 626
            :.:|....||:   |.||.:.|       :|:.|:| |||   .||| |.|:  .|:.:..|.|
Zfish  1005 IPAQLMEEGKEMKTGDHRVQTS-------AGEGSDVNGVGLTSVDSTSVFNRPGASSRMVQLRP 1061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 56/292 (19%)
arhgap29bXP_005163369.1 BAR 253..466 CDD:299863 34/192 (18%)
C1 677..723 CDD:197519 5/49 (10%)
RhoGAP_PARG1 735..945 CDD:239874 51/228 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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