DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and ARHGAP40

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001157903.1 Gene:ARHGAP40 / 343578 HGNCID:16226 Length:674 Species:Homo sapiens


Alignment Length:658 Identity:152/658 - (23%)
Similarity:244/658 - (37%) Gaps:220/658 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRV 98
            |....:||.|::||...|...|....  ||:   .|.:.:|:||::....|:.:.:....::|| 
Human   107 EGQLPEGEAESQWLQDTGLSGLLGGL--GLD---GDHQELLSTLTQTQVAAVCRRLDIYARSVR- 165

  Fly    99 RTKSRPKRKPDIRDVFREFD------------------EQGTVTRSRSATPDSL-DSLQIDEAWT 144
            |....|.|  |:||||..|:                  ..|......:|.|..| :....:||:.
Human   166 RQHKTPVR--DVRDVFGVFNSGKMSSENGDSGMKGAQLSSGASKFPPAAEPGGLQEQAGREEAFN 228

  Fly   145 NNSLPTFVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSA 209
            .:|      .|.:.....:|                 .|.|.:.||.|      ..:|.:|.::.
Human   229 MDS------AYSEQAAVLLQ-----------------RSRPSRGGTSA------WGKCSLPKFTV 264

  Fly   210 DGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENECGRLLPM 274
            .... ||.:|||.:.....|.|                                           
Human   265 PKGR-LGVTRIGDLSLQDMRKV------------------------------------------- 285

  Fly   275 PYNVLSFESICRDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVS 339
                          .||...|:...|||..           .|:||.:...|             
Human   286 --------------PSLALIELTALCDILG-----------LDLKRSKAGKW------------- 312

  Fly   340 LDKRKPFKRRRKEEGNLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIG 404
                      :..|..||||.:::|:..|.:|  ..|:.|||.|:.|:..|.:||...||:||:.
Human   313 ----------KAAETRLFGVPLDSLLEADHKV--LPSTQVPLVLQALLSCLEKRGLDMEGILRVP 365

  Fly   405 GHKQKTELLYNELESTFYQNPDNLDNLFRTATVH--ELSSLLKRWLRELPQPLLTNELIQLFYQC 467
            |.:.:.:.|..:||..||.      .||....||  :.|.||||::|:||.||||.|.:..|...
Human   366 GSQARVKGLEQKLERDFYA------GLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAVV 424

  Fly   468 HTLPSIDQ-MNALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMF---- 527
            ..:|::.| :..|.:|..:||..|||.|::||.|...::..:..|||.:.||:|:|||::|    
Human   425 PNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPNLFLHQG 489

  Fly   528 -PPRYIHPSDNNSIAEQVRMAAQCCRLTNILILRGEKLFQVPNNLIVESQKTM-----------M 580
             ||:.  |.     .::.::|.....:..|::...:.|:.|.:.|:.:.:|..           .
Human   490 RPPKL--PK-----GKEKQLAEGAAEVVQIMVHYQDLLWTVASFLVAQVRKLNDSSSRRPQLCDA 547

  Fly   581 GKKGWHRHRNSN--------EITAK-------------------PSGKASNVGVGHDSTVINKYS 618
            |.|.|.|..:::        |.|.|                   ||.|     |.|   |:.:::
Human   548 GLKTWLRRMHADRDKAGDGLEATPKVAKIQVVWPIKDPLKVPLTPSTK-----VAH---VLRQFT 604

  Fly   619 TNLKHLHP 626
               :||.|
Human   605 ---EHLSP 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 75/227 (33%)
ARHGAP40NP_001157903.1 RhoGAP 319..532 CDD:295372 75/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148558
Domainoid 1 1.000 114 1.000 Domainoid score I6069
eggNOG 1 0.900 - - E1_KOG2200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 185 1.000 Inparanoid score I3952
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309300at33208
OrthoFinder 1 1.000 - - FOG0002326
OrthoInspector 1 1.000 - - otm42220
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14963
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.860

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