DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap32

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017451485.1 Gene:Arhgap32 / 315530 RGDID:1305267 Length:2100 Species:Rattus norvegicus


Alignment Length:702 Identity:143/702 - (20%)
Similarity:257/702 - (36%) Gaps:186/702 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EASYEDGEMEAE---WLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKT 95
            |...|:|.:..:   ||.|.|..:||...|:..|.|.:.::      |..|:|. ...|..|::.
  Rat     2 ETESENGSVGDDSVFWLDSEGTTQLTDGEEEEREESFRKMK------SSIHSEE-DDFVPELHRN 59

  Fly    96 VRVR-------TKSRPKRKPDIRDVFREFDEQG-------TVTRSRSATPDSL---DSLQIDEAW 143
            |..|       |.|...|..|:.::..:...:.       .|...:.:||..|   |::      
  Rat    60 VHPRERPDWEETLSAMARGADVPEIPGDLTLKSCGSTASMKVKHVKKSTPPGLMGCDNI------ 118

  Fly   144 TNNSLPTFVNVYEKNTETA-------------IQCVEQSNEI-----------YLKQNLRRTPSA 184
              :.||.....:.|..|.|             :...|:.|||           ||.|...:..|.
  Rat   119 --HRLPFTKGHFPKMAECAHFHYENVEFGSIQLSLSEEQNEIMKNGCESKELVYLVQIACQGKSW 181

  Fly   185 PPKSGTYADIFRGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSEND 249
            ..|. :|.| ||.......:.:|..      .:|::.  :.||:..:.|       |.||.::..
  Rat   182 IVKR-SYED-FRVLDKHLHLCIYDR------RFSQLS--ELPRSDILKD-------SPESVTQML 229

  Fly   250 ARSQKKKSSEVLSASENECGRLLP------MPYNVLSFESICRDSSSLDSCEVLD--TCDIPSTL 306
            |....:.|:  ::.::..||..|.      ...::|..|....::.::.:..|:.  |...|..|
  Rat   230 AAYLSRLST--IAGNKINCGPALTWMEIDNKGNHLLVHEESSINTPAVGAAHVIKRYTARAPDEL 292

  Fly   307 FTDV-VLISETDM--KRLQTILW----------------LELATIFDRNKV-------------- 338
            ..:| .::|..||  |.|.|  |                :||.    ..||              
  Rat   293 TLEVGDIVSVIDMPPKVLST--WWRGKHGFQVGLFPGHCVELI----NQKVPQSVTNSVPKPVSK 351

  Fly   339 ----------SLDKRKPFKRRRKEEG----NLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGE 389
                      :..|.:|.|::.|:.|    .:||..:...:..    :|.:   ||..|:.....
  Rat   352 KHGKLITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLN----SGFE---VPQVLQSCTAF 409

  Fly   390 LLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFR---TATVHELSSLLKRWLREL 451
            :.|.|. .:|:.|:.|.....:.|.:|.:|      :::.:|.:   ...:|.:.||.|.:.|||
  Rat   410 IERYGI-VDGIYRLSGVASNIQRLRHEFDS------EHVPDLTKEPYVQDIHSVGSLCKLYFREL 467

  Fly   452 PQPLLTNELIQLFYQCHTLPSIDQMNALSI--LCHLLPPENRNTLRSLLSFFNIIINLKDINKMN 514
            |.||||.:|.:.|... ...:.|:...:.|  :...|||.:..||..|:...:::.:...|..|:
  Rat   468 PNPLLTYQLYEKFSDA-VSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMH 531

  Fly   515 VHNVATIMAPSMFPPRYIHPSDNNSIAE--QVRMAAQCCR--LTNILILRGEKLFQV-------- 567
            ..|:|.:.||::...:.|..:..:..|.  :||:.:....  |.::.:|...|:..|        
  Rat   532 AKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSGKISAVMQEGAASL 596

  Fly   568 --PNNLIVESQKTMMGKKGWHRHRNSNEITAKPSGKASNVGVGHDSTVINKY 617
              |.:|:|.|..|.:             :|.:.:...:...|.......|||
  Rat   597 TRPKSLLVSSPSTKL-------------LTLEEAQARTQAQVNSPIVTENKY 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 54/238 (23%)
Arhgap32XP_017451485.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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