DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap21

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001178622.1 Gene:Arhgap21 / 307178 RGDID:1311028 Length:1952 Species:Rattus norvegicus


Alignment Length:655 Identity:136/655 - (20%)
Similarity:247/655 - (37%) Gaps:159/655 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQL 88
            |..:.:|:.|.:.  ||:..::       .|.:|.:::||:..::|.:     ||..|..::   
  Rat   859 LSHDQESVGPPSL--DGQHTSK-------TERSKSYDEGLDDYREDAK-----LSFKHVSSL--- 906

  Fly    89 VRTLNKTVRVRTKSRP-----KRKPDIRDVFREFDEQGTVTRSRSATPDSLDSLQIDEAWTNNSL 148
                 |.:::....:.     .||....:||.:..::|.: :.|....|....:       ..|:
  Rat   907 -----KGIKIADSQKSSEDSGSRKDSSSEVFSDAAKEGWL-QFRPLVTDKGKRV-------GGSI 958

  Fly   149 PTFVNVYEKNTETAIQCVEQSNEIYLKQNLRR--TPSAPPK---------SGTYAD-----IFRG 197
            ..:..:|         .|.:.:.:||.::.|.  |||...:         ..:|::     :||.
  Rat   959 RPWKQMY---------VVLRGHSLYLYKDRREQTTPSEEEQPISVNACLIDISYSETKRRNVFRL 1014

  Fly   198 SQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQK-KKSSEVL 261
            :...|:....:.|..::|.:  |.|||...|.:..|         ...:..|..|:: |:.:.:|
  Rat  1015 TTSDCECLFQAEDRDDMLAW--IKTIQESSNLNEED---------TGVTNRDLISRRIKEYNSLL 1068

  Fly   262 SASENECGRLLPMPYNVLSFESICRDSSSLDSCEVLDTCDIPSTLF-------TDVVLISETDM- 318
            |.:|    :|...|...||...           .:|.....|.|..       ::..|:|:.|. 
  Rat  1069 SKTE----QLPKTPRQSLSIRQ-----------TLLGAKSEPKTQSPHSPKEESERKLLSKDDTS 1118

  Fly   319 --KRLQTILWLELATIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINALIRRDQQVTGTDSSLVPL 381
              |...|  |        |..:....||.|:::....|. |||      |.|.......:..:||
  Rat  1119 PPKDKGT--W--------RRGIPSIVRKTFEKKPAATGT-FGV------RLDDCPPAHTNRYIPL 1166

  Fly   382 FLE---KLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTATVHELSSL 443
            .::   ||:.|   ||....|:.|:.|:......:..||.... .:.|..|:.:|...|  :|||
  Rat  1167 IVDICCKLVEE---RGLEYTGIYRVPGNNAAISSMQEELNKGM-ADIDIQDDKWRDLNV--ISSL 1225

  Fly   444 LKRWLRELPQPLLTNELIQLFYQCHTLPS-IDQMNALSILCHLLPPENRNTLRSLLSFFNIIINL 507
            ||.:.|:||:||.||:....|.:.:.... :|::..|..|.|.||..:..||:.|.:....:...
  Rat  1226 LKSFFRKLPEPLFTNDKYADFIEANRKEDPLDRLRTLKRLIHDLPEHHFETLKFLSAHLKTVAEN 1290

  Fly   508 KDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCCRLTNILILRGEKLF------- 565
            .:.|||...|:|.:..|::     :..|::|.......|..| .::...||...:..|       
  Rat  1291 SEKNKMEPRNLAIVFGPTL-----VRTSEDNMTHMVTHMPDQ-YKIVETLIQHHDWFFTEEGAEE 1349

  Fly   566 --------------QVPNNLIVESQKTMMGKKGWHRHRNSNEITAKPSGKASNVGVGHDSTVINK 616
                          .|||   ::...|.:|:.|......|:..|:..:....:.|.|.|     :
  Rat  1350 PLTAVQEENTVDSQPVPN---IDHLLTNIGRTGVLPGDVSDSATSDSTKSKGSWGSGKD-----Q 1406

  Fly   617 YSTNL 621
            ||..|
  Rat  1407 YSREL 1411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 59/244 (24%)
Arhgap21NP_001178622.1 PDZ_signaling 52..159 CDD:238492
PH_ARHGAP21-like 936..1045 CDD:269955 23/127 (18%)
PH 937..1042 CDD:278594 22/123 (18%)
RhoGAP_ARHGAP21 1147..1342 CDD:239860 55/213 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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