DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap28

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_036016523.1 Gene:Arhgap28 / 268970 MGIID:2147003 Length:756 Species:Mus musculus


Alignment Length:624 Identity:161/624 - (25%)
Similarity:259/624 - (41%) Gaps:142/624 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSNTDLH-----HSDDQ-------DFSEFLNEYYLQS-------NSQSIEPEAS--------YE 38
            |.||..||     .|:.|       ...|||.|  ::|       .||...|.|:        .:
Mouse   108 MLSNESLHPPSFSRSNSQASVDSSASMEEFLRE--IESIKESSVGASQEQPPTAAAAAAEVKPVD 170

  Fly    39 DGEMEAEWLVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSR 103
            :||:|||||...|...|....|:      :|.:.:|:||::..|.|:.:...|..:|:|.:.| :
Mouse   171 EGELEAEWLQDVGLSTLISGNEE------EDGKALLSTLTRTQAAAVKKRYNTYTQTLRKKNK-Q 228

  Fly   104 PKRKPDIRDVFREFDEQGTVTRSRSATPDSLD-SLQIDEAWTNNSLPTFVNVYEKNTETAIQCVE 167
            |.|  |:||:|      |.   |.|...||.: :.|:|.......||...     .|...:..:|
Mouse   229 PVR--DVRDIF------GV---SESPPSDSCEHATQLDGTKEEKDLPGVT-----KTSRPLSILE 277

  Fly   168 QSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADGVEL---LGYSRIGTIQFPRNR 229
            ...:|.:..|.........:|....|.:.|..|       .|:..||   :.||.:.|....||:
Mouse   278 AIPDIAVHTNGSADAEQSVQSTLSDDDYHGKNV-------PAEAEELSFEVSYSEMVTEMPDRNK 335

  Fly   230 SVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSC 294
            .                   .:|..||...||:       :.:                      
Mouse   336 W-------------------KKSDIKKEDYVLT-------KFI---------------------- 352

  Fly   295 EVLDTCDIPSTLF--TDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKRRRKEEGNLF 357
                   |..|.|  |:...:|..|||:::.:..:||...||...:.| ||...:|.|..:..:|
Mouse   353 -------IQKTRFGLTETGDLSVEDMKKIRHLSLIELTAFFDAFGIQL-KRNKTERVRGRDNGIF 409

  Fly   358 GVSINALIRRDQQVTGTDSSL-VPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTF 421
            ||.:..|:..|::   .|.:: |||.|:|...::...|...||:.|:.|...|.:....||::.|
Mouse   410 GVPLTVLLDNDRK---KDPAVKVPLVLQKFFQKVEESGLESEGIFRLSGCTAKVKQYREELDARF 471

  Fly   422 YQNPDNLDNLFRTATVH-ELSSLLKRWLRELPQPLLTNELIQLFYQ-CHTLPSID-QMNALSILC 483
                 |.|........| |.:.:||.:.||||..|...|.|..|.. ....|.|. |..||.::.
Mouse   472 -----NADKFKWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFISLMERGPDIKVQFQALHLMV 531

  Fly   484 HLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAA 548
            ..||..||:|.::|::|||.:|..:..|:||:.|::|:|||::|..|..|     |..|::.:|.
Mouse   532 MALPDANRDTAQALMAFFNKVIANESKNRMNLWNISTVMAPNLFFSRSKH-----SDCEELLLAN 591

  Fly   549 QCCRLTNILILRGEKLFQVPNNLIVE----SQKTMMGKK 583
            ....:..:::...:.|::||:.||.:    ::.||:.||
Mouse   592 TATHIIRLMLKYQKILWKVPSFLITQVRRMNEATMLLKK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 68/227 (30%)
Arhgap28XP_036016523.1 RhoGAP_ARHGAP18 408..619 CDD:239856 68/223 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838663
Domainoid 1 1.000 110 1.000 Domainoid score I6305
eggNOG 1 0.900 - - E1_KOG2200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 187 1.000 Inparanoid score I3900
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309300at33208
OrthoFinder 1 1.000 - - FOG0002326
OrthoInspector 1 1.000 - - otm44275
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14963
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.860

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