Sequence 1: | NP_001036454.1 | Gene: | conu / 3355133 | FlyBaseID: | FBgn0039994 | Length: | 629 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_596743.1 | Gene: | rga1 / 2541022 | PomBaseID: | SPBC3F6.05 | Length: | 1150 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 674 | Identity: | 154/674 - (22%) |
---|---|---|---|
Similarity: | 260/674 - (38%) | Gaps: | 146/674 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 HHSDDQDFSEFLN-----EYYL----QSNSQSIEPEASYEDGEMEAEWLVSAGYPELTKPFEQGL 63
Fly 64 EVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQGTVTRSRS 128
Fly 129 ATPDSLDSLQIDEAWTNNSLPTFVNV-YEKNTETAIQCVEQSNEI-YLKQNLRRTPSAPPKSGTY 191
Fly 192 ADIFRGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPF--------------CSIGRSK 242
Fly 243 ESR--------SENDARSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSCEVLDT 299
Fly 300 CDIPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKR--KPFKRRRKEEGNL-----F 357
Fly 358 GVSINALIRRD--QQVTGTDSSL--VPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELE 418
Fly 419 STFYQNPDNLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQ-MNALSIL 482
Fly 483 CHLLPPENRNTLRSLLSFFNIIINLKDI-----NKMNVHNVATIMAPSMFPPRYIHPSDNNSIAE 542
Fly 543 QVRMAAQCCRLTNILILRGEKLFQVPN--NLIVESQKTMMGKKGW---HRHRNSNEITAKPSGKA 602
Fly 603 SNVGVGHDST-----VINKYSTNL 621 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
conu | NP_001036454.1 | RhoGAP_ARHGAP18 | 356..576 | CDD:239856 | 64/236 (27%) |
rga1 | NP_596743.1 | LIM1_Lrg1p_like | 116..172 | CDD:188777 | |
LIM2_Lrg1p_like | 180..232 | CDD:188778 | |||
LIM | 485..539 | CDD:295319 | 4/21 (19%) | ||
RhoGAP_fLRG1 | 835..1044 | CDD:239862 | 63/223 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |