DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap9

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001272714.1 Gene:Arhgap9 / 216445 MGIID:2143764 Length:648 Species:Mus musculus


Alignment Length:598 Identity:120/598 - (20%)
Similarity:198/598 - (33%) Gaps:209/598 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LQSNSQSIEPEASYEDGEMEAEWLVSAGYPELTK--PFEQGLEVSKKD--LEP---ILTTLSKPH 81
            |..:|.:::|:          |||...|.|.|::  |:   |.:|::.  |.|   :...|..||
Mouse   182 LTRDSSALQPQ----------EWLDPQGLPSLSQSVPW---LALSEQPGALRPCSALPQLLDDPH 233

  Fly    82 AE---------AIVQLVRTLNKTVR---------------------------VRTKSRPKRKPDI 110
            .|         .|.|..|.|.|...                           .|..|||:...|:
Mouse   234 VEERSGLLNMTKIAQGGRKLRKNWGPAWVVLTGSSLVFYRERPPQSASLQGWARAGSRPESSVDL 298

  Fly   111 RDVF----REFDEQGTVTRSRSATPDSLDSLQIDEAWTNNSLPTFVNVYEKNTETAIQCVEQSNE 171
            |...    |:...:..|...|: .|.....||.||       .|.:..:.:...|.|:.:::.|.
Mouse   299 RGAALASGRQLSSRRNVLHIRT-VPGHEFLLQSDE-------ETELRDWHRALRTVIERLDRENP 355

  Fly   172 IYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFC 236
            :    .||.:.|.|                       |:..||                      
Mouse   356 L----ELRLSGSGP-----------------------AELAEL---------------------- 371

  Fly   237 SIGRSKESRSENDARSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSCEVLDTCD 301
            |.|...|..||..::|..:..|...|                    |.|.:.             
Mouse   372 SAGEDDELESEPVSKSLMRLGSRRTS--------------------SRCAEG------------- 403

  Fly   302 IPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVS-LDKRKPFKRRRKEEG----NLFGVSI 361
                          ||.|...            |||:. |..::|..:..:|.|    .:||..:
Mouse   404 --------------TDQKNRV------------RNKLKRLIAKRPTLQSLQERGLFRDQVFGCQL 442

  Fly   362 NALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGH---KQKTELLYNELESTF-- 421
            .:|.:|       :...||.|:...:..:.::|...:|:.|:.|:   .||...|.:...:..  
Mouse   443 ESLCQR-------EGDTVPSFVRLCVEAVDKKGLDVDGIYRVSGNLAVVQKLRFLVDRERAVTSD 500

  Fly   422 --YQNPD--------NLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQ- 475
              |..|:        :||:. ....:|.::..||.:.|||||||:...|:..|.....|...:| 
Mouse   501 GRYMFPEQAGQEGKLDLDSA-EWDDIHVVTGALKLFFRELPQPLVPALLLPDFRDALELSEPEQC 564

  Fly   476 MNALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSI 540
            ::.:..|...||..|.:||:.:|.....:|...|.|:|..||:..:..|::|.|.    .:.:.:
Mouse   565 LSKIQKLIDSLPRPNHDTLKYILEHLCRVIAHSDKNRMTAHNLGIVFGPTLFRPE----QEASDM 625

  Fly   541 AEQVRMAAQCCRL 553
            |..|....|..:|
Mouse   626 AAHVFYPGQLVQL 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 52/214 (24%)
Arhgap9NP_001272714.1 SH3 26..82 CDD:302595
PH_ARHGAP9-like 236..349 CDD:270053 22/120 (18%)
PH 250..348 CDD:278594 19/105 (18%)
ASCH <346..432 CDD:294653 28/193 (15%)
RhoGAP_ARHGAP27_15_12_9 438..642 CDD:239868 52/213 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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