DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conu and Srgap2

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001074480.2 Gene:Srgap2 / 14270 MGIID:109605 Length:1071 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856
Srgap2NP_001074480.2 F-BAR_srGAP2 26..289 CDD:153366
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..211
RhoGAP_srGAP 487..674 CDD:239848
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..726
SH3_srGAP1-3 732..784 CDD:212888
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 795..819
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..918
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 984..1012
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1029..1071
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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