DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and arhgap6

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017210032.1 Gene:arhgap6 / 101882360 -ID:- Length:635 Species:Danio rerio


Alignment Length:506 Identity:115/506 - (22%)
Similarity:199/506 - (39%) Gaps:136/506 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQGTVT------RSRSATPDSLDSLQIDEAWTNNS 147
            :::|::..|||.     ::..:..:.::||....:|      :.:.:....||||..::.     
Zfish     6 IQSLSELERVRL-----QEVSLARLCKDFDLGCQITIPKDGQKRKKSLRRKLDSLSKEKR----- 60

  Fly   148 LPTFVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADGV 212
                    :|.:|.....|..|..|:   |.||......:...     |||.     ||:     
Zfish    61 --------DKESEPQAFGVPLSQVIF---NDRRQKQQQEEREQ-----RGSS-----PLH----- 99

  Fly   213 ELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENECGRLLPMPYN 277
             |..::|..|     :|.:|....|:..|.|:.::|:...|..::                    
Zfish   100 -LHTHTRRNT-----SRDLSSSNSSLSSSSETHTDNNNTPQTPET-------------------- 138

  Fly   278 VLSFESICRDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDK 342
              :..|..|...|:|....||                ::|.:.|:.   |:|:...|   .|.:|
Zfish   139 --ALRSRRRGGVSVDCITDLD----------------DSDSRLLEA---LQLSMPVD---PSSEK 179

  Fly   343 RKPFKRRRKEEGNLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHK 407
            :|..|:...|:     :|:|.:.|:           ||..|:.....|.|.|.:..|:.|:|..|
Zfish   180 KKKKKKTSGEK-----LSLNPIYRQ-----------VPRVLDCCCQHLQRYGLQTVGIFRVGSSK 228

  Fly   408 QKTELLYNELESTFYQNPDNLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPS 472
            ::.    .:|...|.|..:.:  |....:||::::|||.:||::|.||||.||...|..|.:|..
Zfish   229 KRV----RQLREAFDQGAEVI--LDDRHSVHDVAALLKEFLRDMPDPLLTRELYAAFISCASLEK 287

  Fly   473 IDQMNALSILCHLLPPENRNTLRSLLSFFNIII-----------NLKDINKMNVHNVATIMAPSM 526
            .:|...:.:|..|||..|.:||:.||.|.:.:.           |....|||...|:|||     
Zfish   288 SEQHRIIQLLLCLLPACNSDTLQCLLHFLSTVAKHAENSCDEHGNQVMGNKMTSLNLATI----- 347

  Fly   527 FPPRYIHPSDNN----SIAEQVRM--AAQCCRLTNILILRGEKLFQVPNNL 571
            |.|..:|...::    |:...|||  :|....:...:|.:...||.:...|
Zfish   348 FGPNLLHKQKSSEKEFSVQSSVRMEESAAIISVVQYMIDKHHTLFMISAEL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 65/233 (28%)
arhgap6XP_017210032.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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