Sequence 1: | NP_001036454.1 | Gene: | conu / 3355133 | FlyBaseID: | FBgn0039994 | Length: | 629 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031759882.1 | Gene: | arhgap39 / 101732569 | XenbaseID: | XB-GENE-6049004 | Length: | 980 | Species: | Xenopus tropicalis |
Alignment Length: | 614 | Identity: | 114/614 - (18%) |
---|---|---|---|
Similarity: | 198/614 - (32%) | Gaps: | 212/614 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 TKSRPKRKPDI--------------RDVFRE---FDEQGTV---------TRSRSATPDSLDSLQ 138
Fly 139 IDEAWTNNSLPTFVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCD 203
Fly 204 IPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENEC 268
Fly 269 GRLLPMPYNVLSFESICRDSSS--LDSCEVLD------------TCDIPSTLFTDVVLISETDMK 319
Fly 320 RLQTILWLELATIFDRNKVSLDK---------RKPF-----KRRRKEEGNLFGVSINALIRRDQQ 370
Fly 371 VTGTDSSLVPLFLEKLIGELLRRGSREEGL---LRIGGHKQKTE--------------------- 411
Fly 412 ----LLYNELESTFYQNPDNLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPS 472
Fly 473 IDQMNALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVA----TIMAPSMF------ 527
Fly 528 ---------PPRYIHPSDNNSIAEQVRMAAQCCRLTNILILRG---EKLFQVPNN--------LI 572
Fly 573 VESQKTMMGKKGWHRHRNSNEITAKPSGK 601 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
conu | NP_001036454.1 | RhoGAP_ARHGAP18 | 356..576 | CDD:239856 | 51/277 (18%) |
arhgap39 | XP_031759882.1 | PRP40 | 4..>72 | CDD:227435 | |
WW | 46..72 | CDD:395320 | |||
MyTH4 | 731..872 | CDD:395633 | 29/167 (17%) | ||
RhoGAP | 883..>957 | CDD:413382 | 18/93 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |