DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and arhgap19

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_003201186.1 Gene:arhgap19 / 100537002 ZFINID:ZDB-GENE-100922-157 Length:454 Species:Danio rerio


Alignment Length:309 Identity:73/309 - (23%)
Similarity:130/309 - (42%) Gaps:78/309 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 FTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKR----RRKEEGNLFGVSINALIRR 367
            ||::||   :::.||..:...|.:.:....:........|:.    :||::|.:||:.:      
Zfish    58 FTELVL---SNITRLIDLPGAEFSQLLGDEEPKTPNAGFFRSFNFLKRKDKGVVFGMPL------ 113

  Fly   368 DQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLF 432
                  |:..:..::  :||. .|.:....:||.|:.|:..:.:.|..:|.|       ..|..|
Zfish   114 ------TEEGIAQIY--QLIA-YLSKNLHVQGLFRVPGNSLRQQTLREQLNS-------GADIDF 162

  Fly   433 RTATVH--ELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSID-------------QMNALSIL 482
            .....|  ::::|||.:|.|||:||||:..:....:...|.:.|             |:.||.:|
Zfish   163 AAGDFHPNDVATLLKSFLGELPEPLLTHRHLHAHLKITELTTFDDEGNKTSFPDKERQIEALQLL 227

  Fly   483 CHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSD--------NNS 539
            ..|||..||..|:.||.........:|.|||:.||:|.:..|.:..|:.::.||        |:.
Zfish   228 LLLLPTANRTLLKLLLDLLYHTAKQQDKNKMSAHNLALMFGPHVIWPKNMNASDLQENLKKLNSG 292

  Fly   540 IAEQVRMAAQCCRLTNILILRGEKLFQVP------------NNLIVESQ 576
            :|              .||...:|:|:.|            |..|::|:
Zfish   293 MA--------------FLIKHSQKIFRAPAYLREHARLQFANTKILQSK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 61/254 (24%)
arhgap19XP_003201186.1 RhoGAP_ARHGAP19 109..316 CDD:239857 59/242 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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