DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and arhgap40

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_004918589.2 Gene:arhgap40 / 100493159 XenbaseID:XB-GENE-6050151 Length:644 Species:Xenopus tropicalis


Alignment Length:546 Identity:138/546 - (25%)
Similarity:227/546 - (41%) Gaps:136/546 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EDGEMEAEWLVSAGYPEL---TKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVR 99
            ||||.||.||..||...|   ..|.|..:         |::||::..|.|:.:.:.|.:.:||.|
 Frog    83 EDGEAEAAWLQDAGLSTLIGDQYPLEDNI---------IMSTLTQTQAAAVRRRLDTYSYSVRKR 138

  Fly   100 TKSRPKRKPDIRDVFREFDEQGTVTRSRSATPDSLDSLQIDEAWTNNSLPTFVNVYEKNTETAIQ 164
            .| :|.|  |:|.||           :...|.|..                    :.||.:.   
 Frog   139 WK-QPAR--DVRFVF-----------TGKGTADGF--------------------FRKNGKV--- 166

  Fly   165 CVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNR 229
                           ||...|...|                     ||..|  .|:|:....|..
 Frog   167 ---------------RTFGPPQAPG---------------------GVPTL--PRMGSDNQHRVP 193

  Fly   230 SVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSC 294
            ..:|.|    .:..:.||..|..:|::.:.|..|.               :|.....:...|.:.
 Frog   194 GGADIF----DTDVAYSEQAASMRKQEQASVQDAG---------------AFPKFQLNKGRLGTT 239

  Fly   295 EVLDTCDIPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKRRRKEEGNLFGV 359
            :|.|              ::.:|||::..:..:||..:.|...:.| ||...::|:..|..||||
 Frog   240 QVAD--------------LTPSDMKQVPALALIELTALCDVLDLEL-KRNKVQKRKSAESQLFGV 289

  Fly   360 SINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQN 424
            ::.:|:.:||::  ...:.|||.|:.:...:.:.|...:|:|||.|.:.:.:.|...||..||  
 Frog   290 ALPSLLIQDQKL--VPDTKVPLILQAIFTCIEKNGMEIQGILRISGSQARIKNLQQRLEKDFY-- 350

  Fly   425 PDNLDNLFRTATV--HELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQ-MNALSILCHLL 486
                |.||....|  |:.|.|||.:|||||.||||.:.:..|.....:..:.| :.||::|..:|
 Frog   351 ----DGLFSWDDVHPHDASGLLKLFLRELPAPLLTTQYLPAFTAVQNIVDLKQRLQALNLLILIL 411

  Fly   487 PPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCC 551
            |..||:||::||.|...:..::..|.|::.||:||:||::|   ..|...|....|: ::|....
 Frog   412 PEPNRSTLKALLEFLQKVAAMEKTNLMSLWNVSTILAPNLF---LYHCGKNLERGEK-QLAEGTA 472

  Fly   552 RLTNILILRGEKLFQVPNNLIVESQK 577
            .....::...:.|:.||..|:.:.:|
 Frog   473 ASVMAMVHYQDLLWTVPTFLVTQVRK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 71/222 (32%)
arhgap40XP_004918589.2 RhoGAP 286..497 CDD:413382 71/222 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6360
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 158 1.000 Inparanoid score I4169
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309300at33208
OrthoFinder 1 1.000 - - FOG0002326
OrthoInspector 1 1.000 - - otm49450
Panther 1 1.100 - - O PTHR14963
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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