DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap6

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017457773.1 Gene:Arhgap6 / 100363276 RGDID:2323364 Length:985 Species:Rattus norvegicus


Alignment Length:715 Identity:154/715 - (21%)
Similarity:259/715 - (36%) Gaps:210/715 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SQSIEP--------EASYEDG------------EMEAEWLVSAGYPELTKPFEQGLEVSKKDL-E 71
            ::|::|        |...|||            ::.||   |.|....:.|..|.|..::... .
  Rat    35 TRSLDPALISGCGSEMGAEDGLRGSTVSRLNSPQLSAE---SLGSRLASSPRSQHLRATRFPAPR 96

  Fly    72 PILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQGTVTRSRSATPDSLDS 136
            |:.::.|.|                     |.|:.|........:::    |..|||....|:  
  Rat    97 PLCSSFSTP---------------------STPQEKSPSGSFHFDYE----VPLSRSGLKKSM-- 134

  Fly   137 LQIDEAWTNNSLPTFV--NVYEKNTETAI-------QCVEQSNEIYLKQNLRRTPSAPPKSGTYA 192
                 ||   .||:.:  :|..:|..:.:       ..:..|...:|:|   |....||.|.::.
  Rat   135 -----AW---DLPSVLTGSVSGRNPASILGSSGGGPNGIFASPRRWLQQ---RKFQPPPNSRSHP 188

  Fly   193 DI------------FRGSQVRC-DIPLYSADGVELLGYSRIGTIQF-----------------PR 227
            .:            ..|..||. .:|:.|...:|......:...|.                 .|
  Rat   189 YVVWRSEGDFTWNSMSGRSVRLRSVPIQSLSELERARLQEVAFYQLQQDCDLGCQITIPKDGQKR 253

  Fly   228 NRSVSDPFCSIGRSKESRSE---------------ND---------ARSQKKKSSEVLSASENEC 268
            .:|:.....|:|:.|....|               ||         .|.::|.:|:.:|:     
  Rat   254 KKSLRKKLDSLGKEKNKDKEFIPQAFGMPLSQVIANDRAYKLKQDLQREEQKDASDFVSS----- 313

  Fly   269 GRLLPMPYNVLSFESICRDSSSLDSCEVLDTCDIPST------------LFTDVVLISETDMKRL 321
              |||......:.|....:||...:.|..:....|:|            :..|.:...:.:..||
  Rat   314 --LLPFGNKKQNKELSSSNSSLSSTSETPNESTSPNTPEPAPRARRRGAMSVDSITDLDDNQSRL 376

  Fly   322 QTILWLEL-ATIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINALIRRDQQVTGTDSSLVPLFLEK 385
            ...|.|.| |...::.:.:.||:               :|:|.:.|:           ||..::.
  Rat   377 LEALQLSLPAEAQNKKQKARDKK---------------LSLNPIYRQ-----------VPRLVDS 415

  Fly   386 LIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLD-NLFRTATVHELSSLLKRWLR 449
            ....|.:.|.:..|:.|:|..|::...|..|.:.       .:| .|....:||::::|||.:||
  Rat   416 CCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDR-------GVDVCLEEEHSVHDVAALLKEFLR 473

  Fly   450 ELPQPLLTNELIQLFYQCHTLPSIDQMNALSILCHLLPPENRNTLRSLLSFFNIIIN------LK 508
            ::|.||||.||...|.....|...:|:..|.:|.:||||.|.:||..||.|.:|:..      .|
  Rat   474 DMPDPLLTRELYTAFINTLLLEPEEQLGTLQLLIYLLPPCNCDTLHRLLQFLSIVARHAEDNVSK 538

  Fly   509 D-----INKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCCRLTNI------LILRGE 562
            |     .|||...|:|||     |.|..:|...::.....|:.:|:....|.|      :|...|
  Rat   539 DGQEVTGNKMTSLNLATI-----FGPNLLHKQKSSDKEYSVQSSARAEESTAIIAVVQKMIENYE 598

  Fly   563 KLFQVP----NNLIVESQKTMMGKKGWHRHRNSNEITAKPSGKASNV----GVGHDSTVINKYST 619
            .||.||    |.:::...:|......:...|.::: ::.|....|.|    |..|.||..||.|:
  Rat   599 ALFMVPPDLQNEVLISLLETDPDVVDYLLRRKASQ-SSSPDMLQSEVSFSMGGRHSSTDSNKASS 662

  Fly   620  619
              Rat   663  662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 68/241 (28%)
Arhgap6XP_017457773.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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