DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and arhgap44b

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021336115.1 Gene:arhgap44b / 100333556 ZFINID:ZDB-GENE-120206-2 Length:862 Species:Danio rerio


Alignment Length:351 Identity:85/351 - (24%)
Similarity:133/351 - (37%) Gaps:78/351 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 QVRCDI--PLYSADGVELLGYSRIGTIQFPRN---RSVSDPFCSIGR----SKESRSENDARSQK 254
            |:..|:  |||:...||      |..||..|.   :.|.|...:..|    ||.|...|......
Zfish   123 QIERDVVEPLYTLSEVE------IPNIQKQRKHLAKLVLDMDSARTRWHQSSKSSTLSNKETPTG 181

  Fly   255 KKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDS----CEVLDTCDIPSTLFTDVVLISE 315
            .|:..:....|....|:           .||||..|.|.    .:.:|..:...||.........
Zfish   182 AKADALREEMEEAANRM-----------EICRDQLSADMYSFVAKEIDYANYFQTLIEVQAEYHR 235

  Fly   316 TDMKRLQTIL---------WLELATIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINALIRRDQQV 371
            ..::.||::|         |:|               ||...:..||              ...:
Zfish   236 KSLELLQSVLPQIKAQQESWVE---------------KPCYGKPLEE--------------HLTL 271

  Fly   372 TGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTAT 436
            :|.:   :...:|..:..||..|.:||||.|:.....|.:.|...|:...      ||....:|.
Zfish   272 SGRE---IAFPIEACVTMLLDCGLQEEGLFRVAPSASKLKKLKASLDCGV------LDYQEYSAD 327

  Fly   437 VHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSID-QMNALSILCHLLPPENRNTLRSLLSF 500
            .|.::..||.:|||||:||||.:|.:.:.|...:...| ::.||...|..||..|.|..:.|:.|
Zfish   328 PHAIAGALKSYLRELPEPLLTFDLYEDWIQASNIADQDKRLQALLSTCEKLPVANSNNFKYLIKF 392

  Fly   501 FNIIINLKDINKMNVHNVATIMAPSM 526
            ...:...::.|||...|:|.::.|::
Zfish   393 LAKMNEYQEYNKMTPGNIAIVLGPNL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 46/172 (27%)
arhgap44bXP_021336115.1 BAR 22..268 CDD:325158 39/190 (21%)
RhoGAP 257..457 CDD:295372 51/200 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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