DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and LOC100332329

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_009294229.1 Gene:LOC100332329 / 100332329 -ID:- Length:2281 Species:Danio rerio


Alignment Length:664 Identity:140/664 - (21%)
Similarity:245/664 - (36%) Gaps:186/664 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EME-AEW--LVSAGYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRT-- 100
            ||| ||:  |||....|.....|.|.:..|.:     |...|.|....:|.......:...||  
Zfish  1499 EMEDAEYIPLVSLSPLETRSTTEAGPDRLKAN-----TLKEKVHDTHSLQDASPAQPSTPERTTG 1558

  Fly   101 ------KSRPKRK---PDIRDV----FREFDEQGTVTRSRSATPDS-----LDSLQIDEAWTNNS 147
                  |.||.::   |:..||    ..:..|..:.|||.::.|.|     ..|:.|..: ||.:
Zfish  1559 FFRKILKKRPHKEAQTPEDGDVSLASILDHKEAISPTRSHNSKPQSGRPGRTPSIMISHS-TNRA 1622

  Fly   148 LPTFVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADGV 212
                   .|:...:..:.:..:||:                 .:.|.|.|:||. |:   .:.|.
Zfish  1623 -------SEQWNASLNRVITNANEL-----------------RHLDEFLGNQVN-DL---RSRGK 1659

  Fly   213 ELLGYSRI---GTIQFPRN----RSVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASENECGR 270
            :|.|..:|   .|:||..|    .|:|.|  .||..        |.....::..::.|:|.:.|.
Zfish  1660 QLSGTEQIFINATMQFRENIKGMYSISKP--QIGYK--------ALMNSYQNKVIILATEKQKGE 1714

  Fly   271 LLPMPYNVLSFESIC--------------------------RDSSSLDSC----------EVLDT 299
             :|:..|:  |:|:.                          :....|::.          .::.:
Zfish  1715 -VPLVVNL--FQSVLDIFIRAEIKKEEAEPAKPPKGRKMRKKKGKGLENALDHVFTHYQVNIMQS 1776

  Fly   300 CDIPSTLFTDVVLISETDMKRLQTILW-LELATIFDRNKVSLDKR---------KPFKRRRKEE- 353
            ||                  :..:.:| :|.|.:....|:...|:         ..|..::.|: 
Zfish  1777 CD------------------QCTSYIWGMEKAYMCSYCKMVCHKKCICKIVTDCSTFSSKKCEDE 1823

  Fly   354 --GNLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNE 416
              .|.|||.:..|:        .:.:.||:.||.::..:...|...||:.|..|...:.:.|:..
Zfish  1824 PGSNHFGVRVGNLV--------NNKTPVPIVLEIMLEHVEMNGLYTEGIYRKSGSANRMKELHQL 1880

  Fly   417 LESTFYQNPDNLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLP-SIDQMNALS 480
            ||:    .|:|:  ......:|.::.|:|:||||||:||:|......|.....|| ..:|:.|:.
Zfish  1881 LEA----GPENV--CLEDYPIHAVTGLVKQWLRELPEPLMTFTHYNDFLYAIELPEKQEQLQAIY 1939

  Fly   481 ILCHLLPPENRNTLRSLLSFFNIIINLKD--INKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQ 543
            .:...||..|.|||..|:  |:::...|:  .|:|..:::|.:.||.:.  |....:|.....:.
Zfish  1940 RVLEQLPTANFNTLERLI--FHLVRVAKEEKSNRMTPNSLAIVFAPCIL--RCPDSADPLMSMKD 2000

  Fly   544 VRMAAQCCRLTNILILR--GEKLFQV-----PNNLIVESQKTMMGKKGWH--------------R 587
            |.....|..:..|..:|  .||:.::     ...|.|...|.......||              |
Zfish  2001 VAKTTTCVEMLLIEQIRRYNEKMEEIEQLEYAEALAVNQLKLKRKNTCWHLPLRFITPYKEVAIR 2065

  Fly   588 HRNSNEITAKPSGK 601
            .:.|:::...|..:
Zfish  2066 EKPSSDLCVVPENE 2079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 59/229 (26%)
LOC100332329XP_009294229.1 UBQ 13..111 CDD:294102
MYSc 140..969 CDD:214580
MYSc_Myo9 160..964 CDD:276836
DUF4887 1082..1249 CDD:292845
Stathmin <1082..1159 CDD:279209
C1 1764..1812 CDD:237996 7/65 (11%)
RhoGAP_myosin_IXB 1829..2014 CDD:239872 53/202 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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