DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and sh3bp1

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_001345357.4 Gene:sh3bp1 / 100006678 ZFINID:ZDB-GENE-121128-2 Length:670 Species:Danio rerio


Alignment Length:437 Identity:101/437 - (23%)
Similarity:162/437 - (37%) Gaps:109/437 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 ESRSENDARSQKKKSSEVLSASENECGRLLP-----------MPYNVLSFESICRDSSSLDSCEV 296
            ||..:.|..|..:|..|:....:|...:.|.           :|.|.||.|         |..|:
Zfish    79 ESIKDFDGDSSIRKVLEMCCFMQNTLAQTLADFEMKLEKEVLVPLNKLSEE---------DLPEI 134

  Fly   297 LDTCDIPSTLFTD---VVLISET-------------DMKRLQTILWLELATIFDRNKVSL----- 340
            |......:.|.||   ....|||             |::.    .|..|.:|.|:....|     
Zfish   135 LKNKKQFAKLTTDWNNARTRSETSTGPQAKQHGLREDVEE----AWRRLESIKDQYSADLYHFAT 195

  Fly   341 ---DKRKPFKRRRKEEGNLFGVSINALIRRDQQVTGTDSSLVPLF-------------------- 382
               |....|.|..:.:......|.:.|.|...::..:.|...||.                    
Zfish   196 KEDDYASYFTRLLELQAEYHKASYDFLERNITELKESHSHTEPLVSSSENKVFGEPLLSHLQSCR 260

  Fly   383 ------LEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTATVHELS 441
                  :|:.:..|||.|.|||||.|:.......:.|.:.|:|      ..:|:...::..|.::
Zfish   261 RKIAVPIEECVNMLLRTGLREEGLFRLAAAASVMKKLKSSLDS------GTVDHTEFSSDPHAVA 319

  Fly   442 SLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQ-MNALSILCHLLPPENRNTLRSLLSFFNIII 505
            ..||.:|||||:||:|.||...:::.......|: :..|......||.||.|.||.|:.|.:.:.
Zfish   320 GALKCYLRELPEPLMTFELYDDWFEAAGEKETDEKLKLLRTALQKLPTENYNNLRYLIQFLSQLS 384

  Fly   506 NLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAA-QCCRLTNILILRGEKL----- 564
            ..:.:|||...|:|.::.|::..||.   ....|:.:....:: |...:...||...:.|     
Zfish   385 EHQAVNKMTPSNIAIVLGPNLLWPRC---EGETSLLDMASASSVQVVTIIEPLIQHSKSLFPEEA 446

  Fly   565 -FQVP----NNLIVESQKTMMGKKGWHRHRNSNEITAKP---SGKAS 603
             |:||    :.|...||:.:           |:.|...|   ||:.|
Zfish   447 DFEVPVLPESPLSTTSQRPL-----------SDSILPSPPFSSGRPS 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 62/257 (24%)
sh3bp1XP_001345357.4 BAR_SH3BP1 12..249 CDD:153304 37/182 (20%)
RhoGAP 244..446 CDD:295372 52/210 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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