DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and arhgap18

DIOPT Version :10

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_073790123.1 Gene:arhgap18 / 100004252 ZFINID:ZDB-GENE-070502-1 Length:701 Species:Danio rerio


Alignment Length:599 Identity:156/599 - (26%)
Similarity:258/599 - (43%) Gaps:134/599 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DDQDFSEFLNEYYLQSNSQSIEPEASY-----EDGEMEAEWLVSAGYPELTKPFEQGLEVSKKDL 70
            |:|...::..|..:...|...|.:...     ::||.|..||:.||...|   |:|... ..:|.
Zfish   120 DEQAMVDYFKEVEIIQRSGDAETQEELQLKVADEGEQEEAWLMEAGLATL---FDQSAS-DGEDS 180

  Fly    71 EPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQGTVTRSRSATPDSLD 135
            ..:|:||::..|.|:.:.|.||.:|:|.|.|  |...||:|::|:   ...|...|:.       
Zfish   181 IALLSTLTRTQAAAVERRVETLKQTLRKRNK--PYAVPDVREIFK---PSTTAAHSKQ------- 233

  Fly   136 SLQIDEAWTNNSLPTFVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQV 200
                |||                 |:..:...:..|:   :.|..........|       |:..
Zfish   234 ----DEA-----------------ESTERSGSKKQEV---EGLGNGVGLIAAGG-------GADT 267

  Fly   201 RCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKSSEVLSASE 265
            ..||.|..:...:.|.|.        ....:|.|.|          :.|.|....|      .|:
Zfish   268 ETDINLEVSFSEQALVYK--------EELKLSKPQC----------QADDRLPDFK------VSQ 308

  Fly   266 NECGRLLPMPYNVLSFESICRDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQTILWLELA 330
            ::.|:                                     |.|..:|..|||:::.::.:|::
Zfish   309 DKTGQ-------------------------------------TKVGDLSAEDMKKVRRLVLIEMS 336

  Fly   331 TIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINALIRRDQ-QVTGTDSSLVPLFLEKLIGELLRRG 394
            .:||...|.:...|..|.:.:|.| ||||.::.|:.:|| ::.||.   |||.|:.||..:..:|
Zfish   337 ALFDTCGVEVKAHKALKVKVRESG-LFGVPLSVLLDQDQRRIPGTK---VPLILQHLISHIEEQG 397

  Fly   395 SREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLF--RTATVHELSSLLKRWLRELPQPLLT 457
            ...||:|||.|...:.:.:.:|||..||      :.||  .:...|:.:||||.::||||.||||
Zfish   398 LDTEGVLRIPGAATRVKAVCHELEHKFY------EGLFPWESLKQHDAASLLKLFIRELPYPLLT 456

  Fly   458 NELIQLFYQCHTLPS-IDQMNALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATI 521
            .:....|.....||: ..|:.||::|..|||..||:||::|:.||..:|:.||.|||.::|||.:
Zfish   457 VQYFNAFISVLKLPTQKQQLQALNLLVLLLPEHNRDTLKALMEFFQRVIHHKDKNKMTLNNVAVV 521

  Fly   522 MAPSMFPPRYIHPSDNNSIAEQ--VRMAAQCCRLTNILILRGEKLFQVPNNLIVESQK-TMMGKK 583
            |||::|    :.....:.|:||  ..||.....:..:||.....|:.:|..::.:.:| .|..::
Zfish   522 MAPNIF----MCKGFRSKISEQQEFAMATGTANIVRLLIRYQNLLWTIPKFILNQVRKHNMENQR 582

  Fly   584 GWHRHRNSNEITAK 597
            ..:|.|...::..|
Zfish   583 KMNRDRAVKKLLKK 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 81/225 (36%)
arhgap18XP_073790123.1 None

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