DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cta and LOC797518

DIOPT Version :10

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_021331576.2 Gene:LOC797518 / 797518 -ID:- Length:325 Species:Danio rerio


Alignment Length:336 Identity:118/336 - (35%)
Similarity:185/336 - (55%) Gaps:42/336 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSVIYQNVIRGMQVLLDAREKLNIAWGSDGR 199
            :||:|..:||.|||.||:|:|:|.:|:.:..|.::..||:|:|:||.||:..|.||.|...:...
Zfish     5 ILLVGMNDSGTSTFFKQIRLINGEDFNLKQRLGFREAIYENIIQGMWVLVKERNKLGIPLQNSAN 69

  Fly   200 E--------QDAYDAKLMECNSLDVPKFMEYAPPISRLWQDRGIRRAFERR----REFQISDSVS 252
            |        .|....|..|.::     |..|...:..||:|.||:..:.|.    .|:.|.|||.
Zfish    70 EIHEISFTSDDCLRVKFTEPSA-----FQPYVEAVDSLWKDSGIQETYRRSDFKGHEYFICDSVK 129

  Fly   253 YFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFV--------FVDVGGQRTQRQK 309
            |..|.|||:...||:|.::||||.|.....:.:....:::.|||        |:       .|.|
Zfish   130 YHFDNIQRIGQLDYLPHNQDILHARSRWTTLEDMYYVLRDTPFVVAQSSILPFI-------ARMK 187

  Fly   310 WTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNATFKGISIILFLNKTDLL 374
                |:...|:|:|::.||::|::|.:   :|.|.:|.:||.:|:|:..:...:|||..||.|||
Zfish   188 ----FNFRDTTILFIIGSSDYDRMLYD---SNCLADSLSIFKSIINHKYYSSSTIILLFNKMDLL 245

  Fly   375 EQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIYHHFTTAIDTRNINVVF 439
            .:||  ...|||.::|.|.|:||.:.|||.|::|.| .:|:..:...||:|..||:||.||..|:
Zfish   246 REKV--QTADIRKHFPEFQGDPHRLEDVQKFLVQSF-KMRKLKNSGPIYYHMITAVDTENIRTVY 307

  Fly   440 NSVKDTILQRN 450
            |::|..||.:|
Zfish   308 NTIKHAILSKN 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 118/336 (35%)
LOC797518XP_021331576.2 G-alpha 5..318 CDD:206639 117/334 (35%)

Return to query results.
Submit another query.