DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gnaq

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001138271.1 Gene:gnaq / 570108 ZFINID:ZDB-GENE-081104-25 Length:359 Species:Danio rerio


Alignment Length:365 Identity:154/365 - (42%)
Similarity:219/365 - (60%) Gaps:24/365 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 CCGNIITYLVRLRSTPEELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRII 155
            ||           .:.|..|.|..:.|||:.|.::|...||::||||||.||||||||:||||||
Zfish     9 CC-----------LSEEAKEARRINDEIDRQLRRDKKDARRELKLLLLGTGESGKSTFIKQMRII 62

  Fly   156 HGVNFDYELLLEYQSVIYQNVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLMECNSLDVPKFM 220
            ||..:..|....:..::|||:....|.::.|.:.|.|.:..:..:.:|...:     .:||.|..
Zfish    63 HGSGYSEEDRKGFTKLVYQNIFTSSQSMIRAMDTLQILYKYEHNKANANIVR-----EVDVEKVF 122

  Fly   221 EYAPP----ISRLWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATK 281
            .:..|    |..||.|.||:..::||||:|:|||..|:|:.:.|:|.|.|:||.:|:|..|..|.
Zfish   123 LFVNPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNSLDRIANPSYIPTQQDVLRVRVPTT 187

  Fly   282 GVYEFCVKVQNIPFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEES 346
            |:.|:...:|::.|..|||||||::|:||..||: :||||:|||:.||:||||.|....||:|||
Zfish   188 GIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFE-NVTSIMFLVALSEYDQVLVESDNENRMEES 251

  Fly   347 KNIFDTIVNNATFKGISIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFM 411
            |.:|.||:....|:..|:||||||.||||:|:.  .:.:..|:|.::|........:.|||:||:
Zfish   252 KALFRTIITYPWFQNSSVILFLNKKDLLEEKIM--FSHLVDYFPEYDGPQRDAQTAREFILKMFV 314

  Fly   412 SVRRSSSISRIYHHFTTAIDTRNINVVFNSVKDTILQRNL 451
            .:...|. ..||.|||.|.||.||..||.:|||||||..|
Zfish   315 DLNPDSE-KIIYSHFTCATDTENIRFVFAAVKDTILQLTL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 150/344 (44%)
G-alpha 133..451 CDD:206639 141/321 (44%)
gnaqNP_001138271.1 G_alpha 19..357 CDD:214595 150/344 (44%)
G-alpha 40..353 CDD:206639 141/321 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586294
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.760

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