DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gnas

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_001335732.1 Gene:gnas / 557353 ZFINID:ZDB-GENE-090417-2 Length:419 Species:Danio rerio


Alignment Length:372 Identity:144/372 - (38%)
Similarity:204/372 - (54%) Gaps:27/372 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 VRLRSTPEE----LEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNF 160
            :|.|...||    ..:..:|:.|||.|:.||..:::..:|||||||||||||.:|||||:|...|
Zfish    44 LRERRRAEERARVKAENKRSRNIDKSLKAEKREYKQTHRLLLLGAGESGKSTIVKQMRILHVNGF 108

  Fly   161 DYELLLEYQSVIYQNVIRGMQVLLDAREKL----NIAWGSDGREQDAYDAKLMECNSLDVPKFME 221
            :.|...:....|..|:...::.::.|...|    .:|..::   :...|..|...|..|.....|
Zfish   109 NAEEKKQKIQDIKNNIKEAIETIVTAMSVLVPPVQLACPAN---KFRIDYILNLANQKDFEFTTE 170

  Fly   222 YAPPISRLWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEF 286
            :......||||.|::..|||..|:|:.|...||||.|..:...||.||.:|:|.||..|.|::|.
Zfish   171 FYEHTKTLWQDEGVKACFERSNEYQLIDCAQYFLDRIDTVKQSDYTPTDQDLLRCRVLTSGIFET 235

  Fly   287 CVKVQNIPFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFD 351
            ..:|..:.|...||||||.:|:||.:|| :.||:|||:|:||.::.||.||.:||||:|:.|:|.
Zfish   236 RFQVDKVNFHMFDVGGQRDERRKWIQCF-NDVTAIIFVVASSSYNMVLREDNQTNRLQEALNLFK 299

  Fly   352 TIVNNATFKGISIILFLNKTDLLEQKVCNPETDIRWYYPHF------------NGNPHSVLDVQN 404
            .|.||...:.||:||||||.|||.:||...::.|..|:|.|            .|....|...:.
Zfish   300 NIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPDDATPEQGEDPRVTRAKY 364

  Fly   405 FILQMFMSVRRSSSISR--IYHHFTTAIDTRNINVVFNSVKDTILQR 449
            ||...|:.:..:|...|  .|.|||.|:||.||..|||..:| |:||
Zfish   365 FIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRD-IIQR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 140/356 (39%)
G-alpha 133..451 CDD:206639 133/335 (40%)
gnasXP_001335732.1 G_alpha 61..416 CDD:214595 140/355 (39%)
G-alpha 81..413 CDD:206639 133/335 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586267
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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