DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gnao1a

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_957081.1 Gene:gnao1a / 393760 ZFINID:ZDB-GENE-040426-1757 Length:354 Species:Danio rerio


Alignment Length:353 Identity:151/353 - (42%)
Similarity:207/353 - (58%) Gaps:20/353 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSV 171
            ||.....:||.|:|.|:::..|..:.|||||||||||||||.:|||:|||...|..:.:.:|:.|
Zfish     8 EERAALDRSKAIEKNLKEDGITAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGDDVKQYKPV 72

  Fly   172 IYQNVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLMECNSLDVPKFMEYAPPIS--------R 228
            :|.|.|:.:..::.|.:.|.:.:|...|:.||    .|.|   ||...||...|.|        |
Zfish    73 VYSNTIQSLAAIVRAMDTLGLEYGDKERKADA----KMVC---DVVSRMEDTEPYSPELLSAMIR 130

  Fly   229 LWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNI 293
            ||.|.||:..|.|.||:|::||..|:||.:.|:...||.||.:|||..|..|.|:.|.....:|:
Zfish   131 LWSDSGIQECFSRAREYQLNDSAQYYLDSLDRIGAADYQPTEQDILRTRVKTTGIVETHFTFKNL 195

  Fly   294 PFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNAT 358
            .|...||||||::|:||..||: .||:|||.|:.|.:||||.||..|||:.||..:||:|.||..
Zfish   196 HFRLFDVGGQRSERKKWIHCFE-DVTAIIFCVALSGYDQVLHEDETTNRMHESLMLFDSICNNKF 259

  Fly   359 FKGISIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIY 423
            |...||||||||.||..:|:  .::.:...:|.:.| |::..|...:|...|.|..||.: ..||
Zfish   260 FIDTSIILFLNKKDLFAEKI--KKSPLSICFPEYTG-PNTYDDAAAYIQAQFESKNRSPN-KEIY 320

  Fly   424 HHFTTAIDTRNINVVFNSVKDTILQRNL 451
            .|.|.|.||.||.|||::|.|.|:..||
Zfish   321 CHMTCATDTGNIQVVFDAVTDIIIANNL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 149/348 (43%)
G-alpha 133..451 CDD:206639 141/325 (43%)
gnao1aNP_957081.1 G-alpha 34..348 CDD:206639 141/325 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.930

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