DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gpa1

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_595960.1 Gene:gpa1 / 2540414 PomBaseID:SPBC24C6.06 Length:407 Species:Schizosaccharomyces pombe


Alignment Length:429 Identity:135/429 - (31%)
Similarity:219/429 - (51%) Gaps:54/429 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 TRVGAVTGPEAATTSTDGLISNGAERLRLQGSRLQTSRFACFRCCGNIITYLVRLRSTPEELEQ- 111
            |..|.|...:.:.|.|....:.|:          |.:|........||:     ||..|:.:|. 
pombe    11 TSGGEVIQKKLSDTQTSNSSTTGS----------QNARVPVLENWLNIV-----LRGKPQNVESS 60

  Fly   112 --RYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSVIYQ 174
              |.|....         :....:|:||||||:|||:|.:||||:::...|...:..:|:.:|::
pombe    61 GVRVKGNST---------SGGNDIKVLLLGAGDSGKTTIMKQMRLLYSPGFSQVVRKQYRVMIFE 116

  Fly   175 NVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLM--ECNSLDVPKFMEYAPPISRLWQDRGIRR 237
            |:|..:.:||:|.:..|:   |...|.:.|.|.::  ..:..:.|...|....:..|..|..:|.
pombe   117 NIISSLCLLLEAMDNSNV---SLLPENEKYRAVILRKHTSQPNEPFSPEIYEAVHALTLDTKLRT 178

  Fly   238 AFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFVFVDVGG 302
            .........:.|:..|:.|.|.|:..|.|:|:.:||||||..|.|:.|....:....:.|.||||
pombe   179 VQSCGTNLSLLDNFYYYQDHIDRIFDPQYIPSDQDILHCRIKTTGISEETFLLNRHHYRFFDVGG 243

  Fly   303 QRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNATFKGISIILF 367
            ||::|:||..||: :||:::||||.:.:||.|.||...|:::|:..::|:|.|::.|...::|||
pombe   244 QRSERRKWIHCFE-NVTALLFLVSLAGYDQCLVEDNSGNQMQEALLLWDSICNSSWFSESAMILF 307

  Fly   368 LNKTDLLEQKV-CNPETDIRWYYPHFN--GNPHSVLDVQ-------------NFILQMFMSVRRS 416
            |||.||.::|| .:|   |:.::|.:.  |:..:.:..|             .|.|: |.|:.|.
pombe   308 LNKLDLFKRKVHISP---IQKHFPDYQEVGSTPTFVQTQCPLADNAVRSGMYYFYLK-FESLNRI 368

  Fly   417 SSISRIYHHFTTAIDTRNINVVFNSVKDTILQRNLNALM 455
            :|.| .|.|||||.||..:..|..||:|||:..||.:||
pombe   369 ASRS-CYCHFTTATDTSLLQRVMVSVQDTIMSNNLQSLM 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 119/360 (33%)
G-alpha 133..451 CDD:206639 115/335 (34%)
gpa1NP_595960.1 G_alpha 68..406 CDD:214595 117/355 (33%)
G-alpha 75..402 CDD:206639 115/335 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
TreeFam 00.000 Not matched by this tool.
32.910

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