DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and Gnat3

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001074612.1 Gene:Gnat3 / 242851 MGIID:3588268 Length:354 Species:Mus musculus


Alignment Length:349 Identity:137/349 - (39%)
Similarity:206/349 - (59%) Gaps:12/349 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSV 171
            |..|...:|||::|.|:::.....|.|||||||||||||||.:|||:|||...:..:..:|:::|
Mouse     8 ESKESARRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNGYSKQECMEFKAV 72

  Fly   172 IYQNVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLMECNSLD----VPKFMEYAPPISRLWQD 232
            ||.|.::.:..::.|...|.|.:.:....:|......| .|:|:    .|:..|.   |.|||.|
Mouse    73 IYSNTLQSILAIVKAMATLGIDYVNPRSREDQEQLHSM-ANTLEDGDMTPQLAEI---IKRLWGD 133

  Fly   233 RGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFVF 297
            .||:..|||..|:|::||.:|:|:::.||..|.|||..:|:||.|..|.|:.|.....:::.|..
Mouse   134 PGIQACFERASEYQLNDSAAYYLNDLDRLTAPGYVPNEQDVLHSRVKTTGIIETQFSFKDLNFRM 198

  Fly   298 VDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNATFKGI 362
            .||||||::|:||..||: .||.|||..:.|.:|.||.||.:.||:.||.::|::|.|:..|...
Mouse   199 FDVGGQRSERKKWIHCFE-GVTCIIFCAALSAYDMVLVEDEEVNRMHESLHLFNSICNHKYFATT 262

  Fly   363 SIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIYHHFT 427
            ||:|||||.||.::||......|  .:|.:.| |::..|..|:|...|:.:........||.|.|
Mouse   263 SIVLFLNKKDLFQEKVAKVHLSI--CFPEYTG-PNTFEDAGNYIKNQFLDLNLKKEDKEIYSHMT 324

  Fly   428 TAIDTRNINVVFNSVKDTILQRNL 451
            .|.||:|:..||::|.|.|::.||
Mouse   325 CATDTQNVKFVFDAVTDIIIKENL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 135/344 (39%)
G-alpha 133..451 CDD:206639 127/321 (40%)
Gnat3NP_001074612.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 7/17 (41%)
G_alpha 13..352 CDD:214595 135/344 (39%)
G-alpha 34..348 CDD:206639 127/321 (40%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 35..48 12/12 (100%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 173..181 4/7 (57%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 196..205 5/8 (63%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 265..272 5/6 (83%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 324..329 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841800
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.760

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