DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gpa-12

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_509557.1 Gene:gpa-12 / 181157 WormBaseID:WBGene00001674 Length:355 Species:Caenorhabditis elegans


Alignment Length:351 Identity:177/351 - (50%)
Similarity:243/351 - (69%) Gaps:13/351 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 KSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGV-NFDYELLLEYQSVIYQNVI 177
            ::|.|:|.|.||:...|||:.|||||:||||||||:|||.||||. .|..:.:..|:..||||.|
 Worm    11 RTKTIEKELHKERKIMRRQINLLLLGSGESGKSTFVKQMHIIHGAGEFTADEVRAYRQQIYQNAI 75

  Fly   178 RGMQVLLDAREKLNIAWGSDGREQDAYDAKLME------CNSLDVPKFMEYAPPISRLWQDRGIR 236
            ..|:||||||.||.|||....|:.:.  .|:|.      ...:|...|:|.||.||..|.|..||
 Worm    76 SAMRVLLDARNKLGIAWEDPKRQVEV--EKVMRFSVGDLLKGIDFTTFVEVAPIISDFWNDAAIR 138

  Fly   237 RAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFVFVDVG 301
            :.:|:|..||||||..||.:.|.|:|.||:.||::|||.|||||:|:.|...::..|||.|:|||
 Worm   139 KTYEQRNLFQISDSCQYFFEHIPRIAMPDFYPTNRDILFCRKATRGISEHIFEINKIPFRFIDVG 203

  Fly   302 GQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNATFKGISIIL 366
            |||:|||||.:|| :.:|||:|:|:|:|:|||:.|||:|||:.||:::|:|||||..|..:||||
 Worm   204 GQRSQRQKWFQCF-TDITSILFMVASNEYDQVILEDRRTNRVVESRSVFETIVNNRAFSNVSIIL 267

  Fly   367 FLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIYHHFTTAID 431
            |:||.|||::||  |::|||.|:..|.|:...|.|||.|::..|.:.||..: ...::|||||:|
 Worm   268 FMNKNDLLQEKV--PKSDIRQYFTDFTGDHTLVRDVQFFLVDKFEASRRDRA-RPFFYHFTTAVD 329

  Fly   432 TRNINVVFNSVKDTILQRNLNALMLQ 457
            |.||..||..|:::||::||..||:|
 Worm   330 TENIRRVFRDVRESILEQNLKTLMMQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 174/347 (50%)
G-alpha 133..451 CDD:206639 163/324 (50%)
gpa-12NP_509557.1 G_alpha 10..353 CDD:214595 174/347 (50%)
G-alpha 30..349 CDD:206639 163/324 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157369
Domainoid 1 1.000 329 1.000 Domainoid score I626
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I1388
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D299429at33208
OrthoFinder 1 1.000 - - FOG0003447
OrthoInspector 1 1.000 - - oto19317
orthoMCL 1 0.900 - - OOG6_106101
Panther 1 1.100 - - LDO PTHR10218
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4590
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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