DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and odr-3

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_506290.1 Gene:odr-3 / 179806 WormBaseID:WBGene00003850 Length:356 Species:Caenorhabditis elegans


Alignment Length:347 Identity:140/347 - (40%)
Similarity:203/347 - (58%) Gaps:6/347 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSV 171
            |..|...::|||:|.|..:|......||||||||||.||||.||||:|:|...|..|.:.|.:::
 Worm     8 ENSEGNARNKEIEKQLNADKRAGSSIVKLLLLGAGECGKSTVLKQMQILHSNGFTEEEVNEKRAI 72

  Fly   172 IYQNVIRGMQVLLDARE-KLNIAWGSDGRE-QDAYDAKLMECNSLDVPKFMEYAPPISRLWQDRG 234
            :|.|.:..|..:|.|.: .|::...:..:| :.|...|:.|..........|.:..|..||.|.|
 Worm    73 VYNNTVSAMCTILRAMDGVLHLPLENGQKEAEKAIVMKVQENGEEGEALTEEVSKAIQSLWADPG 137

  Fly   235 IRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFVFVD 299
            :::|||.|.|:|:.||..||||..||::.|.|.|..:|||:.|.||.||.|...|::.:.|...|
 Worm   138 VKKAFEMRSEYQLPDSAKYFLDNCQRISEPGYRPNDQDILYSRVATTGVVEVKFKIKELDFRVFD 202

  Fly   300 VGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNATFKGISI 364
            |||||::|:||..||| :|.||||:.:.||:||||.||..|||:.||..:|::|.|:..|...::
 Worm   203 VGGQRSERRKWIHCFD-NVESIIFITAISEYDQVLFEDETTNRMIESMQLFNSICNSTWFLSTAM 266

  Fly   365 ILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIYHHFTTA 429
            |||:||.||..:|:  ...:|...:|.:.|. .:..:..:||.|.|..:..:.....||.|.|.|
 Worm   267 ILFMNKKDLFMEKI--QRVNITTAFPDYEGG-QNYEEAVSFIKQKFAELNLNPDKKTIYMHETCA 328

  Fly   430 IDTRNINVVFNSVKDTILQRNL 451
            .||..:.:|.:||.|||:|:||
 Worm   329 TDTNQVQLVISSVIDTIIQKNL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 138/342 (40%)
G-alpha 133..451 CDD:206639 130/319 (41%)
odr-3NP_506290.1 G_alpha 14..354 CDD:214595 138/341 (40%)
G-alpha 34..350 CDD:206639 130/319 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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