DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gpa-3

DIOPT Version :10

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001309498.1 Gene:gpa-3 / 179319 WormBaseID:WBGene00001665 Length:353 Species:Caenorhabditis elegans


Alignment Length:353 Identity:134/353 - (37%)
Similarity:202/353 - (57%) Gaps:10/353 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LRSTPEELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLL 166
            |..:.|:.|...|||.|||.:.:...:.::.||||||||||.||||.||||||:|...|..|...
 Worm     3 LCQSAEDKELTLKSKAIDKEMMQNHMSQQKVVKLLLLGAGECGKSTVLKQMRILHDHGFTAEEAE 67

  Fly   167 EYQSVIYQNVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLMECNSL--DVPKF-MEYAPPISR 228
            :.:||::.|.::.|..:|...|.|.:.:....||.||  ..:||.:.:  :...| .|.|..|..
 Worm    68 QQKSVVFNNTLQAMTAILKGMEALRMTFDKPIRENDA--KFVMESHKMLQEAKVFPEELANAIQA 130

  Fly   229 LWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNI 293
            ||.|:.:::...:..|||:.:|..:||..:.|:..|||.||.:|||..|..|.|:.|...:::::
 Worm   131 LWNDKAVQQVIAKGNEFQMPESAPHFLSSLDRIKLPDYNPTEQDILLSRIKTTGIVEVKFQMKSV 195

  Fly   294 PFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNAT 358
            .|...||||||::|:||..||: .|.:|||:.:.||:||||.||..|||:.||..:|::|.|:..
 Worm   196 DFRVFDVGGQRSERKKWIHCFE-DVNAIIFIAAISEYDQVLFEDETTNRMIESMRLFESICNSRW 259

  Fly   359 FKGISIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIY 423
            |...|:||||||.||..:|:  ..|.|:..:|.:.| ..:..:...:|.:.|..:..:.. ..||
 Worm   260 FINTSMILFLNKKDLFAEKI--KRTSIKSAFPDYKG-AQTYDESCRYIEEKFDGLNANPE-KTIY 320

  Fly   424 HHFTTAIDTRNINVVFNSVKDTILQRNL 451
            .|.|.|.||..:.::.:||.|.|:|.||
 Worm   321 MHQTCATDTDQVQMILDSVIDMIIQANL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 131/343 (38%)
gpa-3NP_001309498.1 G-alpha 34..348 CDD:206639 123/320 (38%)

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