DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gpa-4

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_499921.2 Gene:gpa-4 / 176865 WormBaseID:WBGene00001666 Length:359 Species:Caenorhabditis elegans


Alignment Length:376 Identity:139/376 - (36%)
Similarity:218/376 - (57%) Gaps:37/376 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 CFRCCGNIITYLVRLRSTPEELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQM 152
            ||...|:               |.:.:||.||:.|..:......::||||||||||||||.::||
 Worm     3 CFHSTGS---------------EAKKRSKLIDEQLRHDHERCVGEIKLLLLGAGESGKSTIVRQM 52

  Fly   153 RIIHGVNFDYELLLEYQSVIYQNVIRGMQVLLDAREKLNIAWGSDGREQDA----------YDAK 207
            ||:|...|:.:..:.|:.|::.|:::.|..:|.|.:.|||::....||:||          .:|:
 Worm    53 RILHETGFNKQEQMAYRPVVFSNMVQSMLAILKAMQPLNISFTDAAREEDARMFISHFLHVNNAE 117

  Fly   208 LMECNSLDVPKFMEYAPPISRLWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKD 272
            |.|..||::...|:      :||.|.|:::..:|..|:|::||..|:.:.:.|:::..|:||..|
 Worm   118 LSEAFSLELSDLMK------QLWMDEGVKKCVKRAHEYQLNDSAEYYFNALDRISSSSYLPTQDD 176

  Fly   273 ILHCRKATKGVYEFCVKVQNIPFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAED 337
            ||..|..:.|:.|.....:::.|...||||||::|:||..||| |||::||.|:.||:|..||||
 Worm   177 ILRARVKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFD-SVTAVIFCVALSEYDLRLAED 240

  Fly   338 RKTNRLEESKNIFDTIVNNATFKGISIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDV 402
            :..||:.||..:||:||||..|...||||||||.|:.|:::  ..|.:...:|.:.|. .::.:.
 Worm   241 QTMNRMHESMQLFDSIVNNCWFTETSIILFLNKMDIFEERI--RYTPLTVCFPEYQGG-MTITET 302

  Fly   403 QNFILQMF--MSVRRSSSISRIYHHFTTAIDTRNINVVFNSVKDTILQRNL 451
            ..||...|  ::.|::.:...||.|||.|.||.||..||::|.|.|::.||
 Worm   303 STFIQSRFEILNKRQTPAQKEIYSHFTCATDTNNIRFVFDAVTDIIIRNNL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 135/352 (38%)
G-alpha 133..451 CDD:206639 128/329 (39%)
gpa-4NP_499921.2 G_alpha 12..357 CDD:214595 135/352 (38%)
G-alpha 33..353 CDD:206639 128/329 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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