DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gpa-11

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001254088.1 Gene:gpa-11 / 173759 WormBaseID:WBGene00001673 Length:529 Species:Caenorhabditis elegans


Alignment Length:455 Identity:135/455 - (29%)
Similarity:215/455 - (47%) Gaps:71/455 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SDTLSGTLTHLMEEHRTRVGAVTGPEAATTSTDGLISNGAERLRLQGSRLQTSRFAC------FR 90
            ::|.|.|...:.::.:...| ..||.::|                  ..:::|.||.      |.
 Worm    99 ANTTSSTNRTVSQQDKLAAG-TPGPHSST------------------HNIESSAFATADITLGFL 144

  Fly    91 CCGNI-ITYLVRLR------STPEELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTF 148
            .||.: .|..|..|      :.....:...|:..|::.|||||...::.:|:||||..|.||||.
 Worm   145 LCGRLSFTTQVNNRVNVCGGTEMSAADMARKNSLINRQLEKEKIDSKKMLKILLLGGPECGKSTI 209

  Fly   149 LKQMRIIHGVNF---DYELLLEYQSVIYQNVIRGMQVLLDAREKLNIA---WGSDGREQDAYDAK 207
            .|||:|||...|   ||   :.::.:||.|:::.|..||:|.|..:..   ..|..|..:.|.:.
 Worm   210 FKQMKIIHMNGFSDLDY---VNFRYLIYSNIMQSMDQLLEAAEFFHFPPDDSPSIRRALNHYKSY 271

  Fly   208 LMECNSLDVPKFMEYAPPISRLWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKD 272
            .:..::.:|....|.|..:|:|:....|:....|:.|.::.||..||||:|.|::..:|.||..|
 Worm   272 KVRYSTSEVELNRELADSLSKLYNAEFIKSVLNRKNELKLLDSAVYFLDDIDRISAHEYKPTEMD 336

  Fly   273 ILHCRKATKGVYEFCVKVQNIPFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAED 337
            :|..|..|.|:.|.....:......|||||||::::||..||| :|..::|:.:.|.:: :..||
 Worm   337 VLRARVPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFD-NVNGVLFIAAISGYN-LYDED 399

  Fly   338 R----------KTNRLEESKNIFDTIVNNATF-KGISIILFLNKTDLLEQKVCN-PETDIRWYYP 390
            .          |||||..|..:|..|.|:..| |..::||||||.|:.::|:.. |.|.....|.
 Worm   400 EENRKDDGTPTKTNRLRYSMELFKRIANHQCFSKKTAMILFLNKIDIFKEKIGKYPLTTCFKNYK 464

  Fly   391 HFNGNPHSVLDVQNFILQMFMSVRRSSSIS-------RIYHHFTTAIDTRNINVVFNSVKDTILQ 448
            ..|....:.         .:::.|.|..:|       .:|.|.|.|.|||||:.||:|..|.|.:
 Worm   465 GVNAFEPAC---------KYVTDRFSRLVSGDIQHEKPLYTHITNATDTRNIDRVFDSCMDVIFK 520

  Fly   449  448
             Worm   521  520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 119/362 (33%)
G-alpha 133..451 CDD:206639 112/341 (33%)
gpa-11NP_001254088.1 G_alpha 173..527 CDD:214595 119/362 (33%)
G-alpha 194..523 CDD:206639 112/341 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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