DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and goa-1

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_492108.1 Gene:goa-1 / 172505 WormBaseID:WBGene00001648 Length:354 Species:Caenorhabditis elegans


Alignment Length:353 Identity:147/353 - (41%)
Similarity:208/353 - (58%) Gaps:20/353 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSV 171
            ||.....:|:.|:|.|:::.....:.:||||||||||||||.:|||:|||...|..|...:|:.|
 Worm     8 EERAALERSRMIEKNLKEDGMQAAKDIKLLLLGAGESGKSTIVKQMKIIHESGFTAEDYKQYKPV 72

  Fly   172 IYQNVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLMECNSLDVPKFMEYAPPIS--------R 228
            :|.|.::.:..:|.|...|.:::||..||   .||||:    :||...||...|.|        |
 Worm    73 VYSNTVQSLVAILRAMSNLGVSFGSADRE---VDAKLV----MDVVARMEDTEPFSEELLSSMKR 130

  Fly   229 LWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNI 293
            ||.|.|::..|.|..|:|::||..||||:::||....|.||.:|||..|..|.|:.|.....:|:
 Worm   131 LWGDAGVQDCFSRSNEYQLNDSAKYFLDDLERLGEAIYQPTEQDILRTRVKTTGIVEVHFTFKNL 195

  Fly   294 PFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNAT 358
            .|...||||||::|:||..||: .||:|||.|:.||:||||.||..|||:.||..:||:|.||..
 Worm   196 NFKLFDVGGQRSERKKWIHCFE-DVTAIIFCVAMSEYDQVLHEDETTNRMHESLKLFDSICNNKW 259

  Fly   359 FKGISIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIY 423
            |...||||||||.||.|:|:  .::.:...:|.::|. ....:...:|...|.:..:|:: ..||
 Worm   260 FTDTSIILFLNKKDLFEEKI--KKSPLTICFPEYSGR-QDYHEASAYIQAQFEAKNKSAN-KEIY 320

  Fly   424 HHFTTAIDTRNINVVFNSVKDTILQRNL 451
            .|.|.|.||.||..||::|.|.|:..||
 Worm   321 CHMTCATDTTNIQFVFDAVTDVIIANNL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 145/348 (42%)
G-alpha 133..451 CDD:206639 139/325 (43%)
goa-1NP_492108.1 G_alpha 14..352 CDD:214595 145/347 (42%)
G-alpha 34..348 CDD:206639 139/325 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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