DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gpa-14

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001020966.2 Gene:gpa-14 / 172269 WormBaseID:WBGene00001676 Length:408 Species:Caenorhabditis elegans


Alignment Length:411 Identity:113/411 - (27%)
Similarity:201/411 - (48%) Gaps:65/411 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 CFRCCGNIITYLV--------RLRSTPEELEQRYKS------KEIDKFLEKEKHTFRRQVKLLLL 138
            |::|.......:|        .|.:..||||.:.:.      .||:|.|..||.|:...:|:|:|
 Worm    14 CYQCMHGPDGCMVPSRNGEGTELYAHSEELEAKLRELARRGHMEIEKELALEKKTYGSHIKILIL 78

  Fly   139 GAGESGKSTFLKQMRIIH--GVNFDYELLLEYQSV-------IYQNVIRGMQVL---LDAREKLN 191
            |...|||||..|||:|||  |...|.| |::|:.:       ||..:|.|.:|:   ||..|.:.
 Worm    79 GGPLSGKSTIFKQMQIIHVDGFKTDQE-LIQYRGLIDNNIRDIYLQLIAGSRVVGIPLDPIEHIT 142

  Fly   192 IAWGSDGREQDAYDAKLMECNSLDVPKFMEYAPPISRLWQDRGIRRAFERRREFQISDSVSYFLD 256
            .       |.|...|.:.:  :..|....|...|::..|..:.|:..::||.||::.||..|:|:
 Worm   143 Y-------EIDEIYAPMSD--AFSVRTISELLEPLTEFWNSKQIQEIYKRRCEFELLDSTKYYLE 198

  Fly   257 EIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFVFVDVGGQRTQRQKWTRCFDSSVTSI 321
            .:.|:|.|.|:|..:||:|.||||..:.....:...:..:.:||||||::|:||...||.:.. :
 Worm   199 NLTRIADPTYLPNQEDIVHSRKATMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKV-V 262

  Fly   322 IFLVSSSEFDQVLAEDRKTNRLEESK-------------------NIFDTIVNNATFKGISIILF 367
            :|::..:.:    |:..:.:|:|.|:                   .||:.:...:.......:||
 Worm   263 LFVIDLTGY----AKRSEESRMELSRFPKFFRDVGSNAYDMKVALKIFNEVAAASALANAVFLLF 323

  Fly   368 LNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIYHHFTTAIDT 432
            .||.||.::.:  .:.:::..:..|:|. ::..:...:|.:.|  :|.:||...::.|||||.:|
 Worm   324 FNKVDLFKEIL--SQVNLQPCFSKFDGE-NTYEETSKYICEKF--IRAASSKKSVFPHFTTATNT 383

  Fly   433 RNINVVFNSVKDTILQRNLNA 453
            .|:.:||.:..:::.:.|..|
 Worm   384 ENVKLVFRACMESVFKANAKA 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 105/379 (28%)
G-alpha 133..451 CDD:206639 96/348 (28%)
gpa-14NP_001020966.2 G_alpha 52..406 CDD:214595 105/373 (28%)
G-alpha 73..401 CDD:206639 96/347 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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