DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cta and gna15.2

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_002667410.2 Gene:gna15.2 / 100332929 ZFINID:ZDB-GENE-110408-31 Length:367 Species:Danio rerio


Alignment Length:367 Identity:143/367 - (38%)
Similarity:217/367 - (59%) Gaps:17/367 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 CGNIITYLVRLRSTPEELEQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIH 156
            |..|:.:|     :.||......:.||.:.|:::|...|:::|:||||:|||||:||||||||||
Zfish     8 CPCIVWFL-----SEEEKNAIDINNEIKRILQEQKKQQRKEIKVLLLGSGESGKTTFLKQMRIIH 67

  Fly   157 GVNFDYELLLEYQSVIYQNVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLMECNSLDVPKFM- 220
            |..|..:....:..::|||:.:.||.:.:|..:|.|.:.:.  :.:.|.....:.:...:.|.. 
Zfish    68 GQGFSDDERHVFTKLVYQNIFKSMQAMTEAMSELKIPYANP--QSEVYATWFQDQDPHKITKLQR 130

  Fly   221 EYAPPISRLWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYE 285
            .|...|..||.|:||:..:.||||:|:.||..|||..:.|:|...|:||::|||..|..|.|:.:
Zfish   131 SYVEAIRHLWADKGIKSCYSRRREYQLLDSTKYFLSNLDRIAADIYIPTNQDILQVRFPTSGITD 195

  Fly   286 FCVKVQNIPFVFVDVGGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIF 350
            .....:.:....|||||||.||:||..||: :|||:||:.|.||:||.|.|:.|.||:.||.::|
Zfish   196 HSFNFKKMILRIVDVGGQRGQRKKWIHCFE-NVTSLIFVASLSEYDQRLEENNKDNRMLESLSLF 259

  Fly   351 DTIVNNATFKGISIILFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRR 415
            .|.:::..|...|:||||||.|:||:|:  ..::::.|:|.|.|.|.:..|...||.:::.....
Zfish   260 YTTIHSKWFAYSSVILFLNKIDILEEKI--QFSNLKSYFPEFKGKPRNGQDAIQFIKELYTHNAY 322

  Fly   416 SS---SISRIYHHFTTAIDTRNINVVFNSVKDTILQRNLNAL 454
            ||   |...:|.|:|.|.||.||..||:.|||.:|   ||||
Zfish   323 SSETKSSKNVYFHYTCATDTNNIRSVFSDVKDILL---LNAL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 138/347 (40%)
G-alpha 133..451 CDD:206639 129/321 (40%)
gna15.2XP_002667410.2 G_alpha 23..363 CDD:214595 138/347 (40%)
G-alpha 44..361 CDD:206639 131/324 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586232
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.