DRSC/TRiP Functional Genomics Resources

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Protein Alignment cta and gnat1

DIOPT Version :9

Sequence 1:NP_001036421.1 Gene:cta / 3355131 FlyBaseID:FBgn0000384 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001096278.1 Gene:gnat1 / 100124843 XenbaseID:XB-GENE-1003264 Length:350 Species:Xenopus tropicalis


Alignment Length:346 Identity:139/346 - (40%)
Similarity:216/346 - (62%) Gaps:13/346 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 EQRYKSKEIDKFLEKEKHTFRRQVKLLLLGAGESGKSTFLKQMRIIHGVNFDYELLLEYQSVIYQ 174
            |::: |:|::|.|:::.....|.|||||||||||||||.:|||:|||...:..|..||:.|:||.
 Frog     8 EEKH-SRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFISIIYG 71

  Fly   175 NVIRGMQVLLDAREKLNIAWGSDGREQDAYDAKLME-CNSLD---VPKFMEYAPPISRLWQDRGI 235
            |.::.|..::.|...|||.:|...|:.|:  .||:. .:::|   :||  |.:..|.|||:|.||
 Frog    72 NTLQSMLAIVRAMNTLNIQYGDPARQDDS--RKLLHLADTIDEGSMPK--EMSDIIGRLWKDTGI 132

  Fly   236 RRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHCRKATKGVYEFCVKVQNIPFVFVDV 300
            :..|:|..|:|::||..|:|::::||.||.||||.:|:|..|..|.|:.|.....:::.|...||
 Frog   133 QACFDRASEYQLNDSAGYYLNDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFGFKDLNFRMFDV 197

  Fly   301 GGQRTQRQKWTRCFDSSVTSIIFLVSSSEFDQVLAEDRKTNRLEESKNIFDTIVNNATFKGISII 365
            ||||::|:||..||: .||.|||:.:.|.:|.||.||.:.||:.||.::|::|.|:..|...||:
 Frog   198 GGQRSERKKWIHCFE-GVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIV 261

  Fly   366 LFLNKTDLLEQKVCNPETDIRWYYPHFNGNPHSVLDVQNFILQMFMSVRRSSSISRIYHHFTTAI 430
            |||||.|:..:|:......|  .:|.::| |::..|..::|...|:.:.....:..||.|.|.|.
 Frog   262 LFLNKKDVFTEKIKKAHLSI--CFPDYDG-PNTYEDAGSYIKTQFLELNMRRDVKEIYSHMTCAT 323

  Fly   431 DTRNINVVFNSVKDTILQRNL 451
            ||.|:..||::|.|.|::.||
 Frog   324 DTENVKFVFDAVTDIIIKENL 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctaNP_001036421.1 G_alpha 112..455 CDD:214595 138/344 (40%)
G-alpha 133..451 CDD:206639 131/321 (41%)
gnat1NP_001096278.1 G-alpha 30..344 CDD:206639 131/321 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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