Sequence 1: | NP_001036415.2 | Gene: | lt / 3355130 | FlyBaseID: | FBgn0002566 | Length: | 841 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010365.3 | Gene: | VPS41 / 851653 | SGDID: | S000002487 | Length: | 992 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 923 | Identity: | 202/923 - (21%) |
---|---|---|---|
Similarity: | 373/923 - (40%) | Gaps: | 211/923 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 NEEDVEPKFKYHRLANDLKYMLNADVITCSAVHLKFLIFGTFRGRVCIFDHQGNSVYSNLSASER 82
Fly 83 HTHQVAVNNIDVDHKGEYVATCSDDGKVNITGLFSSDNNHSLSFGKFIKVVSLEPDSKAHIKRFV 147
Fly 148 VGD--DKLILYERNLL-------------KKLKPVELCS-VEGSVLSICWHGNFIAWASHIGVRV 196
Fly 197 YDLNERCSLGLIKWEVPPQERLEN--------FRCHLRWSNKHTLLIGWVDTI---RVCVIRKRN 250
Fly 251 SIEAS--------------TGNLPVYIVDPISTFQTT--------------FYVCGLAPLSAKQL 287
Fly 288 VVLGF---------------------RKEKSSCFKALRPVLCVIEYKMNNSEEICTDSLTLRGFE 331
Fly 332 EYTVNDYSLGGIIEEN--RFYIVAPKDIVVASLIETDDRIEWLIKHSKFEEAMELISANGGNVPV 394
Fly 395 LSVAKLYINHLLALKKYD---DAAKLCLRMLGN----------DKVL--WEEEVFKFVKCQQLRS 444
Fly 445 VSAYLPTSDECKLDPHVYEMVLYEFLKFDVCG-FLNLIKEWPSHLYDGLAVINAIHDNFRKH--- 505
Fly 506 --------------------YANQLLESLALLYSYQGDFESALRMYLKLQNKDVFQLIR------ 544
Fly 545 RY--ELYDV-----------ISKLIIPLIQLDRDCAFEILLDKKKIKTEIVVHQL-EHN-----Q 590
Fly 591 EYLYWYLDSLLKKDPS---NVFQKKLISLYAIFDRNKLLPFLKRSKDYDIQEALVICKQE-NFYP 651
Fly 652 EIVYLLGCMGGVEASEALNIIIHRIRDIEMAIEFCKEHDDSDLWNALIN------EFSK------ 704
Fly 705 --HPEIVTKVLDGIVDYFSPAVVVGKIKMGQNIPNLRQSLIKMLRHYNLQGE-------ILSSAQ 760
Fly 761 QIQLNDYFEIHSE 773 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lt | NP_001036415.2 | WD40 repeat | 33..81 | CDD:293791 | 9/47 (19%) |
WD40 | <42..204 | CDD:295369 | 45/177 (25%) | ||
WD40 repeat | 90..123 | CDD:293791 | 12/32 (38%) | ||
WD40 repeat | 130..168 | CDD:293791 | 13/52 (25%) | ||
CLH | 570..707 | CDD:128594 | 46/160 (29%) | ||
Clathrin | 580..708 | CDD:279031 | 45/151 (30%) | ||
VPS41 | NP_010365.3 | WD40 | 145..179 | CDD:197651 | 11/37 (30%) |
CLH | 753..896 | CDD:128594 | 44/144 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157346577 | |
Domainoid | 1 | 1.000 | 90 | 1.000 | Domainoid score | I1769 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2066 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 152 | 1.000 | Inparanoid score | I1109 |
Isobase | 1 | 0.950 | - | 0.919607 | Normalized mean entropy | S2845 |
OMA | 1 | 1.010 | - | - | QHG54432 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004492 | |
OrthoInspector | 1 | 1.000 | - | - | oto99401 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103391 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12616 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1654 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.740 |