DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slmap and TRAF3IP3

DIOPT Version :9

Sequence 1:NP_001036397.2 Gene:Slmap / 3355127 FlyBaseID:FBgn0040011 Length:897 Species:Drosophila melanogaster
Sequence 2:NP_001307072.1 Gene:TRAF3IP3 / 80342 HGNCID:30766 Length:551 Species:Homo sapiens


Alignment Length:643 Identity:132/643 - (20%)
Similarity:216/643 - (33%) Gaps:200/643 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 ADSNNEASTKNQENNNMELCDSN-TVC-----------------------IDRRPAEV-----SQ 130
            |:|......:.||......|..| |.|                       ..||..|:     :|
Human    16 AESYEAKCERRQEIRESRRCRPNVTTCRQVGKTLRIQQREQLQRARLQQFFRRRNLELEEKGKAQ 80

  Fly   131 HAMNMAMNSVLNANNTGVGVRVTTACSLFSPLGVLNNSALQRE-VASECGTLQVSSVPPTSGVDL 194
            |.         .|...|...|......|..||......:..|| |......:..:..||.||:..
Human    81 HP---------QAREQGPSRRPGQVTVLKEPLSCARRISSPREQVTGTSSEVFPAQHPPPSGICR 136

  Fly   195 DI---------GLESAPTPCKGAAKIVLLCEPKSHKFETRSILLQPNQDCKVGRLIAKSKAGEGN 250
            |:         ||....||.|         :|..|...|:                         
Human   137 DLSDHLSSQAGGLPPQDTPIK---------KPPKHHRGTQ------------------------- 167

  Fly   251 AIFDCKVLSRNHAILWYTPDGKFWVKDTKSSNGTFINDNKLGSDPAELHYGDIVKFGVEVIENSR 315
                                       ||:...|..||....::           :||.|::.  
Human   168 ---------------------------TKAEGPTIKNDASQQTN-----------YGVAVLDK-- 192

  Fly   316 QEVHGCILARVALFLPNGQEAISVEAEQMMLTVPNRISFDEVQRLSSFLQEAAQREKSLKAKLSS 380
                                                    |:.:||.:|:||.|||..||.|:..
Human   193 ----------------------------------------EIIQLSDYLKEALQRELVLKQKMVI 217

  Fly   381 LQGVLDNTRKNSAMCWQSMITEDQLLHKINILEKKLQMMEKNIPENALRNEIVKLLEDKTTYQLT 445
            ||.:|....:.|...|:..:.||:|..|:..||.:|....:......::..::::.:.|.:|:..
Human   218 LQDLLSTLIQASDSSWKGQLNEDKLKGKLRSLENQLYTCTQKYSPWGMKKVLLEMEDQKNSYEQK 282

  Fly   446 AKEALRKVYQERCDAMQMLSKMEMAYATSENECGILRAQVLTLKQTLTDFNTRLEELQQEYMEFK 510
            |||:|:||.:|:.:|.|.|...:.:.|.:|.:|...|:|...||:......|:..||        
Human   283 AKESLQKVLEEKMNAEQQLQSTQRSLALAEQKCEEWRSQYEALKEDWRTLGTQHREL-------- 339

  Fly   511 KESVRQEQEAKEQ--ESRSLEVLNGKLTTQELELKELRLQVSRIH--RDLSESDTEHLKERIVLK 571
             ||.....::|.|  :||.|: :|..|...|.|.::|:.::..:.  |||...||:.|::::...
Human   340 -ESQLHVLQSKLQGADSRDLQ-MNQALRFLENEHQQLQAKIECLQGDRDLCSLDTQDLQDQLKRS 402

  Fly   572 NLDTI-------NLDDYDHAQDRALNERDDNESSDDDILSVSPAKNVLSE-----TKKRKLKLSN 624
            ..:.:       .|......|...|.|::...:..|..|.|...|:..:|     |.|.|    :
Human   403 EAEKLTLVTRVQQLQGLLQNQSLQLQEQEKLLTKKDQALPVWSPKSFPNEVEPEGTGKEK----D 463

  Fly   625 PDLEEGNYKSNVLRLLKNSDLGKGEEGSSVLKAIFNGDDEAFEC--KVKEEEDMANDS 680
            .||.: ..:...|:|     ..|.:|...:...:.|..||...|  |::...:..|.|
Human   464 WDLRD-QLQKKTLQL-----QAKEKECRELHSELDNLSDEYLSCLRKLQHCREELNQS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlmapNP_001036397.2 FHA 216..311 CDD:238017 10/94 (11%)
FHA <225..326 CDD:224630 8/100 (8%)
TRAF3IP3NP_001307072.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..95 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..178 11/98 (11%)
Smc 201..>517 CDD:224117 86/335 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157112
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15715
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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