DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slmap and slmapb

DIOPT Version :10

Sequence 1:NP_001036397.2 Gene:Slmap / 3355127 FlyBaseID:FBgn0040011 Length:897 Species:Drosophila melanogaster
Sequence 2:XP_005162107.1 Gene:slmapb / 393146 ZFINID:ZDB-GENE-040426-809 Length:377 Species:Danio rerio


Alignment Length:412 Identity:86/412 - (20%)
Similarity:175/412 - (42%) Gaps:85/412 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 EQMMLTVPNRISF--DE--------------VQRLSSFLQEAAQREKSLKAKLSSLQGVLDNTRK 390
            ||.:....|::|.  ||              :|||:..||||.::..|.|.|...|||:|:..::
Zfish     3 EQKLKDPINKVSLIKDELSRSTVEASESEKVIQRLNQELQEANEQPNSSKYKCVELQGLLEEEKR 67

  Fly   391 NSAMCWQSMITEDQLLHKINILEKKLQMMEKNIPENALRNEIVKLLEDKTTYQLTAKEALRKVYQ 455
            .:..      ..::...::.:|:.:||.:::.: || ||::     :|...:      ::|:...
Zfish    68 ANKQ------QAEESAKQMKVLQTQLQKLQEEM-EN-LRDQ-----KDSAVF------SMRQETH 113

  Fly   456 ERCDAMQMLSK-MEMAYATSENECGILRAQVLTLKQTLTDFNTRLEELQQEYMEFKK--ESVRQE 517
            ...:.:|:|.: ||...|..|:|...|:..:.||       .:.||:.||...::::  |||:..
Zfish   114 AAQEEVQVLRRTMEKTAAEREHEVSALKGNLATL-------TSELEKWQQAANKYERELESVQAS 171

  Fly   518 Q-EAKEQESRSLEVLNGKLTTQELELKELRLQVSRIHRDLSESDTEHLKERIVLKNLDTINLDDY 581
            . :..:|..|:.:...|:|...:.:.:.||...:.:..:..:...:..||:..|:|.::....:.
Zfish   172 HLQQNQQRDRATKQQAGELEKVQKDCESLRRDCASLRSEREQLADKQQKEKASLQNENSSLRSEK 236

  Fly   582 DHAQDRALNERDDNESSDDDILSVSPAKNVLSETKKRKLKLSNPDLEEGNYKSNVLRLLKNSDLG 646
            :..|.:......:.:||.....|       ||.|.| .|:.:..|||:   :.:||:.....|.|
Zfish   237 EQLQKKQQQLEKELDSSKKQNTS-------LSNTVK-SLEKTQADLEK---RLSVLQEEHQRDNG 290

  Fly   647 KGEEGSSVLKAIFNGDDEAFECKVKEEEDMANDSVPTEFVSRNTSEIVDHFKNHSSTTHTILEDS 711
            :.|:.:|.:|.:           .||.|:|          ....|.:...|:|..       |:.
Zfish   291 QLEQSNSRIKEL-----------QKEYEEM----------QAELSGLRGKFENAE-------EEK 327

  Fly   712 AATKLSAPNAESKEKLVDVEEN 733
            .:..|....::.:.:|:..::|
Zfish   328 RSVSLELQQSQERLRLMQDKDN 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlmapNP_001036397.2 FHA_SLMAP 208..331 CDD:438731
EnvC 322..>558 CDD:443969 52/235 (22%)
CC1_SLMAP-like 356..417 CDD:425371 16/74 (22%)
slmapbXP_005162107.1 Smc <61..>366 CDD:440809 67/354 (19%)
Blue background indicates that the domain is not in the aligned region.

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