Protein Alignment Slmap and Slmap

DIOPT Version :10

• Sequence 1: NP_001036397.2
• Gene: Slmap / 3355127
• FlyBaseID: FBgn0040011
• Length: 897
• Species: Drosophila melanogaster
• Sequence 2: XP_006252603.1
• Gene: Slmap / 290533
• RGDID: 1307674
• Length: 845
• Species: Rattus norvegicus
• Alignment Length: 784
• Identity: 216/784 - (27%)
• Similarity: 367/784 - (46%)
• Gaps: 175/784 - (22%)

  Fly   208 AAKIVLLCEPKSHKFETRSILLQPNQDCKVGRLIAKSKAGEGNAIFDCKVLSRNHAILWYT-PDG 271
            :|..:..|.|.||.|:.|.:.|  ::..|:||.:|:.:..:.||.|||||||||||::|:. ...
  Rat     3 SALAIFTCRPNSHPFQERHVYL--DEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTS 65

  Fly   272 KFWVKDTKSSNGTFINDNKLG-----SDPAELHYGDIVKFGVEVIENSRQEVHGCILARVALFLP 331
            ||:::|||||||||||..:|.     |.|.|:..|||::|||:|.||:|:..||||::.:.||||
  Rat    66 KFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLP 130

  Fly   332 NGQEA----------ISVEAEQMMLTVPNRISFDEVQRLSSFLQEAAQREKSLKAKLSSLQGVLD 386
            :|.||          :....:::....|:..| .|:.:||.:||||..||:.|:.||::||.:|.
  Rat   131 DGMEARLRSDVIHAPLPSPVDKVAANTPSMYS-QELFQLSQYLQEALHREQMLEQKLATLQRLLA 194

  Fly   387 NTRKNSAMCWQSMITEDQLLHKINILEKKLQMMEKNIPENALRNEIVKLLEDKTTYQLTAKEALR 451
            .|::.|...||::|.||:||.::.::..:||...||..|::||.|:|.|.|||.:|:.||||:||
  Rat   195 ITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELVALQEDKHSYETTAKESLR 259

  Fly   452 KVYQERCDAMQMLSKMEMAYATSENECGILRA---------------------QVLTLKQTLTDF 495
            :|.||:.:.::.||::|.:.:.:|:||..||.                     ::..|...|...
  Rat   260 RVLQEKIEVVRKLSEVERSLSNTEDECTHLREMNERTQEELRELANKYNGAVNEIKDLSDKLKAA 324

  Fly   496 NTRLEELQQEYMEFKKE--SVRQEQEAKEQESRS-LEVL-------NGKLTT--------QELEL 542
            ..:.||:||:....|||  :...:.|.||||.:: :|.|       |.:||.        ||..|
  Rat   325 EGKQEEIQQKGQAEKKELQAKIDDMEEKEQELQAKIEALQADNDFTNERLTALQVRLEPLQEKTL 389

  Fly   543 KE---LRLQVSRIHRDLSESDTEHLKERIVLKN-LDTINLDDYDHAQDRAL-------------- 589
            ||   |.:||......::.| ||  |||::.|: .|...:..:...|.:.:
  Rat   390 KECSSLGIQVDDFLPKINGS-TE--KERLLSKSGGDCTFIHQFIECQKKLMVQGHLTKVVEESKL 451

  Fly   590 ---NERDDNESSDDDILSVSPAKNVLSETKKR-----------KLKLSNPDLE------EGNYKS 634
               |:....||...|.||.|..|:....|..:           |:.|...||:      |....:
  Rat   452 SKENQAKAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGTQAETEAKQDT 516

  Fly   635 NVLR--LLKNSDLGKGEEGSSV-LKAIFNGDDEAFECKVKEEE---------------DMANDSV 681
            ..||  |::..:|.:..:.... |:|:...:.:|:..:|:|..               ||.|
  Rat   517 QHLRKELVEAQELARASKQKCFDLQALLEEERKAYRNQVEESAKQIQVLQVQLQRLHMDMEN--- 578

  Fly   682 PTEFVSRNTSEIVDHFKNHSSTTHTILEDSAATKLSAPNAESKEKLVDVEENLNI---------- 736
                                      |::...|::|:    :::||:..::.:.:
  Rat   579 --------------------------LQEEKDTEISS----TRDKLLSAQDEILLLHQAAAKAVS 613

  Fly   737 ---PNALPTEQAIDMLQEECDTYKKKTAHLTSEIHFLQGQIELLKKQLEKGVDHNFATNLQEEEN 798
               .:.:..::.:..::.|.:.::|..:....||..||...:|..:|.|. .....||.||.|..
  Rat   614 ERDTDFMSLQEELKKVRAELEGWRKAASEYEEEIRSLQSTFQLRCQQCEV-QQREEATRLQGELE 677

  Fly   799 SLPRETLELIDNRDSTEGVWNEDIATINNPNVENEEELIVYKELLENSELNNMQLRKEISELHLK 863
            .|.:| .::::|          :..::...||....||...::.|.||:..:::|..::|.|.:.
  Rat   678 KLKKE-WDVLEN----------ECRSLKKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMT 731

  Fly   864 HKHI 867
            .|.:
  Rat   732 RKEL 735

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Slmap	NP_001036397.2	FHA_SLMAP	208..331	CDD:438731	59/128 (46%)
		EnvC	322..>558	CDD:443969	92/287 (32%)
		CC1_SLMAP-like	356..417	CDD:425371	24/60 (40%)
Slmap	XP_006252603.1	FHA_SLMAP	3..130	CDD:438731	62/132 (47%)
		SMC_prok_B	<163..812	CDD:274008	143/608 (24%)
		CC1_SLMAP	163..225	CDD:409287	23/61 (38%)