Protein Alignment Slmap and slmp-1

DIOPT Version :10

• Sequence 1: NP_001036397.2
• Gene: Slmap / 3355127
• FlyBaseID: FBgn0040011
• Length: 897
• Species: Drosophila melanogaster
• Sequence 2: NP_001294342.1
• Gene: slmp-1 / 187433
• WormBaseID: WBGene00019766
• Length: 578
• Species: Caenorhabditis elegans
• Alignment Length: 566
• Identity: 161/566 - (28%)
• Similarity: 274/566 - (48%)
• Gaps: 71/566 - (12%)

  Fly   211 IVLLCEPKSHKFETRSILLQPNQD-CKVGRLIAKSKAGEGNAIFDCKVLSRNHAILWYTPDGKFW 274
            :.|:..||||.||.|.|.:..:.| .|:||.:|:.:|...||:||||||||||||||:. ||:||
 Worm     6 VSLVATPKSHPFEERRIKVNGSNDPVKIGRAVARIQATAENAVFDCKVLSRNHAILWFR-DGEFW 69

  Fly   275 VKDTKSSNGTFINDNKL-------GSDPAELHYGDIVKFGVEVIENSRQ--EVHGCILARVALFL 330
            :||||||||||:|:.||       .:|...:..|||::.|||::||:.:  .|:|||.|.:..|.
 Worm    70 LKDTKSSNGTFVNNEKLQQTVSGRDTDVRRVFSGDIIQLGVEIVENANKVPVVYGCIYAVINCFN 134

  Fly   331 PNGQ-----EAISVEAEQMMLT--VPNRISFDEVQRLSSFLQEAAQREKSLKAKLSSLQGVLDNT 388
            .:|:     ...|.|.::...|  |.||..|    ::..::.||..|||..:.||:.|..::...
 Worm   135 ADGKLMENTGPASEEGQRTTTTTLVSNRKLF----QMQQYISEAQHREKQREDKLTELMSIIAAN 195

  Fly   389 RKNSAMCWQSMITEDQLLHKINILEKKLQMM--EKNIPENALRNEIVKLLEDKTTYQLTAKEALR 451
            .:.:...|::::.||:||.:|..||.:|.::  ..|.|:.. :.|::|::::||.::...||.:|
 Worm   196 EQAAETAWKALVNEDRLLARIESLEAQLSILSSNNNNPDKQ-KEELLKMIDEKTKFEAKTKEMIR 259

  Fly   452 KVYQERCDAMQMLSKMEMAYATSENECGILRAQVLTLKQTLTD----FNTRLEELQQ---EYMEF 509
            ::.:|..:....|..||.:..|:|.....||::...|:..|.:    |:.:..||:|   :.:|.
 Worm   260 RLIEENGETTSRLKDMERSLETTEQTYQQLRSRNEDLETALAETTEMFDAKAAELEQATADLIEK 324

  Fly   510 KKESVRQEQEAKEQESRSLEVLNGKLTTQELELKELRLQVSRIHRDLSESDTE-HLKERIVLKNL 573
            :|.....|::..:.:.::|: |:......|......||..:.|:......:.| ||.       :
 Worm   325 QKVVTTYEEKLTDLQQKNLK-LSKSCVINETASGLSRLLANSINSGSFIDEPELHLL-------I 381

  Fly   574 DTINLDDY--DHAQDRALNERDDNESSDDDIL--------SVSPAKNVLSETKKRKLKLSNPDLE 628
            .|:....|  .|.::...:..|::.:||...|        :.|...:..||.||:|.:..:....
 Worm   382 STLKSASYLPPHTRETTSSSNDNSSASDSAELHTQLINGFAQSSESSEESEEKKKKPQQQDDKTT 446

  Fly   629 EGNYKSNVLRL-LKNSDLGKGEEGSSVLKAIFNGDDEAFECKVKEEEDMANDSVPTEFVSRNTSE 692
            ...|...:|.| .||.:|    |.::.:         |...:|:|.......|...|.:..:.|.
 Worm   447 IEAYLKTILELQAKNREL----EMTAAM---------ATMPEVQENHGCLEASSLKETLEFSPSG 498

  Fly   693 IVDHFKNHSSTTHTILEDSAATKLSAPNAESKEKLV----DVEENL 734
            .|..|.  .|.:..:...|.:|...||..:.:..:|    |..|||
 Worm   499 NVSFFP--PSESANLSGSSTSTSSQAPLWQKQATMVMKKPDELENL 542

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Slmap	NP_001036397.2	FHA_SLMAP	208..331	CDD:438731	63/129 (49%)
		EnvC	322..>558	CDD:443969	60/251 (24%)
		CC1_SLMAP-like	356..417	CDD:425371	16/60 (27%)
slmp-1	NP_001294342.1	FHA_SLMAP	3..134	CDD:438731	62/128 (48%)
		CC1_SLMAP	162..224	CDD:409287	18/65 (28%)
		SMC_prok_B	<171..344	CDD:274008	43/173 (25%)