DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17493 and AT3G03000

DIOPT Version :10

Sequence 1:NP_001036396.2 Gene:CG17493 / 3355126 FlyBaseID:FBgn0040010 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_186950.1 Gene:AT3G03000 / 821161 AraportID:AT3G03000 Length:165 Species:Arabidopsis thaliana


Alignment Length:142 Identity:47/142 - (33%)
Similarity:80/142 - (56%) Gaps:1/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ELSEAQKCDIKEAFDLFDNEGTGYIEVKELKVAIRALGFEPKKEEIKRMISDIDKDCSGRIAFNV 98
            :|.:.|..:::|.|..||....|.:...||...:|:||.:|.::::..:|...|::.:|.:.|:.
plant    12 KLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSE 76

  Fly    99 FLQLMTIKMAEKDTKEEILKA-FRLFDDDDTGKISFRNLKRVARELGETLTDEELREMIDEADLD 162
            |:.|:...:.:....::.||| ||:||.|..|.|:...|.....:||..||.|||..||.|||.|
plant    77 FVALVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRD 141

  Fly   163 NDGEVNQEEFLR 174
            .||.::.:||::
plant   142 GDGCIDFQEFVQ 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17493NP_001036396.2 PTZ00183 26..182 CDD:185503 47/142 (33%)
AT3G03000NP_186950.1 PTZ00184 10..157 CDD:185504 47/142 (33%)

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