DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17493 and AT2G46600

DIOPT Version :10

Sequence 1:NP_001036396.2 Gene:CG17493 / 3355126 FlyBaseID:FBgn0040010 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_566082.1 Gene:AT2G46600 / 819272 AraportID:AT2G46600 Length:135 Species:Arabidopsis thaliana


Alignment Length:109 Identity:33/109 - (30%)
Similarity:54/109 - (49%) Gaps:4/109 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EPKKEEIKRMISDIDKDCSGRIAFNVFLQLMTIKMAEKDTKEEILKAFRLFDDDDTGKISFRNLK 137
            ||.:   |.|:.:..........:...|.:|..||..::...|:.|.|.|..|.:...|:..:|:
plant     2 EPTE---KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLR 63

  Fly   138 RVARELG-ETLTDEELREMIDEADLDNDGEVNQEEFLRIMKKTS 180
            |.:..|| |.::.|:.:.|:.|.|||.||.:||.||..:|.:.|
plant    64 RNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17493NP_001036396.2 PTZ00183 26..182 CDD:185503 33/109 (30%)
AT2G46600NP_566082.1 PTZ00183 <3..103 CDD:185503 30/102 (29%)
EF-hand_8 57..106 CDD:404678 19/48 (40%)

Return to query results.
Submit another query.