DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17493 and cetn3

DIOPT Version :10

Sequence 1:NP_001036396.2 Gene:CG17493 / 3355126 FlyBaseID:FBgn0040010 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001018335.1 Gene:cetn3 / 552931 ZFINID:ZDB-GENE-050522-152 Length:167 Species:Danio rerio


Alignment Length:151 Identity:85/151 - (56%)
Similarity:117/151 - (77%) Gaps:3/151 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RKKSGPKFELSEAQKCDIKEAFDLFDNEGTGYIEVKELKVAIRALGFEPKKEEIKRMISDIDKDC 90
            |||   :.||::.||.:|||||:||..:....|:..|||||:||||||.||.::.:::.|.|::.
Zfish    16 RKK---RRELTDEQKDEIKEAFELFGTDKDKEIDYHELKVAMRALGFEVKKVDVLKILKDYDREG 77

  Fly    91 SGRIAFNVFLQLMTIKMAEKDTKEEILKAFRLFDDDDTGKISFRNLKRVARELGETLTDEELREM 155
            :|:|:|..|.:::|..:.|:|.||||||||:|||||:|||||.|||:||||||||.::||:||.|
Zfish    78 TGKISFEDFREVVTDMILERDPKEEILKAFKLFDDDETGKISLRNLRRVARELGEDMSDEDLRAM 142

  Fly   156 IDEADLDNDGEVNQEEFLRIM 176
            |||.|.|.|||:||:||:.||
Zfish   143 IDEFDTDGDGEINQDEFISIM 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17493NP_001036396.2 PTZ00183 26..182 CDD:185503 85/151 (56%)
cetn3NP_001018335.1 PTZ00183 13..167 CDD:185503 85/151 (56%)

Return to query results.
Submit another query.