DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17493 and myl12b

DIOPT Version :10

Sequence 1:NP_001036396.2 Gene:CG17493 / 3355126 FlyBaseID:FBgn0040010 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001004813.1 Gene:myl12b / 448060 XenbaseID:XB-GENE-991019 Length:172 Species:Xenopus tropicalis


Alignment Length:163 Identity:49/163 - (30%)
Similarity:81/163 - (49%) Gaps:6/163 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TVPAKRGTQQGRKKSGPKFELSEAQKCDIKEAFDLFDNEGTGYIEVKELKVAIRALGFEPKKEEI 79
            |...|:..|:........|:.|:.|  :.||||::.|....|:|:.::|...:.:|...|..|.:
 Frog     8 TKTTKKRPQRATSNVFAMFDQSQIQ--EFKEAFNMIDQNRDGFIDKEDLHDMLASLEKNPTDEYL 70

  Fly    80 KRMISDIDKDCSGRIAFNVFLQLMTIKMAEKDTKEEILKAFRLFDDDDTGKISFRNLKRVARELG 144
            ..|::    :..|.|.|.:||.:...|:...|.::.|..||..||::..|.|....|:.:...:|
 Frog    71 DAMMN----EAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEGIGSIQEDTLRELLTTMG 131

  Fly   145 ETLTDEELREMIDEADLDNDGEVNQEEFLRIMK 177
            :..||||:.|:..||.:|..|..|..||.||:|
 Frog   132 DRFTDEEVDELFREAPIDKKGNFNYNEFTRILK 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17493NP_001036396.2 PTZ00183 26..182 CDD:185503 46/152 (30%)
myl12bNP_001004813.1 PTZ00184 25..163 CDD:185504 44/143 (31%)

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