DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17493 and cam1

DIOPT Version :10

Sequence 1:NP_001036396.2 Gene:CG17493 / 3355126 FlyBaseID:FBgn0040010 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_593340.1 Gene:cam1 / 2543039 PomBaseID:SPAC3A12.14 Length:150 Species:Schizosaccharomyces pombe


Alignment Length:142 Identity:61/142 - (42%)
Similarity:88/142 - (61%) Gaps:0/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LSEAQKCDIKEAFDLFDNEGTGYIEVKELKVAIRALGFEPKKEEIKRMISDIDKDCSGRIAFNVF 99
            |::.|..:.:|||.|||.:..|.|...||.|.:|:||..|...|::.||:::|.|.:|.|.|..|
pombe     6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEF 70

  Fly   100 LQLMTIKMAEKDTKEEILKAFRLFDDDDTGKISFRNLKRVARELGETLTDEELREMIDEADLDND 164
            |.:|..||.:.|.:||:.:||::||.|..|.|:...|..|...|||.|:.||:.:||.|||.|.|
pombe    71 LTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGD 135

  Fly   165 GEVNQEEFLRIM 176
            |.:|.|||.|::
pombe   136 GVINYEEFSRVI 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17493NP_001036396.2 PTZ00183 26..182 CDD:185503 61/142 (43%)
cam1NP_593340.1 PTZ00184 5..150 CDD:185504 61/142 (43%)

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