DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17493 and cmd-1

DIOPT Version :10

Sequence 1:NP_001036396.2 Gene:CG17493 / 3355126 FlyBaseID:FBgn0040010 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_503386.1 Gene:cmd-1 / 178614 WormBaseID:WBGene00000552 Length:149 Species:Caenorhabditis elegans


Alignment Length:143 Identity:71/143 - (49%)
Similarity:96/143 - (67%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ELSEAQKCDIKEAFDLFDNEGTGYIEVKELKVAIRALGFEPKKEEIKRMISDIDKDCSGRIAFNV 98
            :|:|.|..:.||||.|||.:|.|.|..|||...:|:||..|.:.|::.||:::|.|.:|.|.|..
 Worm     4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68

  Fly    99 FLQLMTIKMAEKDTKEEILKAFRLFDDDDTGKISFRNLKRVARELGETLTDEELREMIDEADLDN 163
            ||.:|..||.:.|::|||.:|||:||.|..|.||...|:.|...|||.|||||:.|||.|||:|.
 Worm    69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

  Fly   164 DGEVNQEEFLRIM 176
            ||:||.|||:.:|
 Worm   134 DGQVNYEEFVTMM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17493NP_001036396.2 PTZ00183 26..182 CDD:185503 71/143 (50%)
cmd-1NP_503386.1 PTZ00184 1..149 CDD:185504 71/143 (50%)

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