DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17490 and RPL5

DIOPT Version :9

Sequence 1:NP_001036395.2 Gene:CG17490 / 3355125 FlyBaseID:FBgn0040009 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_015194.1 Gene:RPL5 / 855972 SGDID:S000006052 Length:297 Species:Saccharomyces cerevisiae


Alignment Length:113 Identity:23/113 - (20%)
Similarity:50/113 - (44%) Gaps:17/113 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 MRLQHNAEALQEYKKHPDSLRQKLYRE-----YKQQQLISMSK---NIRRVNAAIK-TSLEYHLQ 439
            |..|.:|::.....:.....|::  ||     |::::|::..|   |..:....:: |:.:...|
Yeast     1 MAFQKDAKSSAYSSRFQTPFRRR--REGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQ 63

  Fly   440 VPIDIVRDNVLLQAAQSLDLDQKSCIYAVLN------VRLIDSRPLLQ 481
            :....:..:|:|.||.|.:|.:....:.:.|      ..|:.:|..||
Yeast    64 IISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQ 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17490NP_001036395.2 None
RPL5NP_015194.1 PTZ00069 1..282 CDD:240254 23/113 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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