DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL5 and Rpl5

DIOPT Version :9

Sequence 1:NP_001036387.1 Gene:RpL5 / 3355124 FlyBaseID:FBgn0064225 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_112361.1 Gene:Rpl5 / 81763 RGDID:619825 Length:297 Species:Rattus norvegicus


Alignment Length:299 Identity:198/299 - (66%)
Similarity:246/299 - (82%) Gaps:2/299 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIA 65
            ||||||||||.|||||||:|||||||||||||||||..||||||||||||:|||::|:||..|||
  Rat     1 MGFVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIA 65

  Fly    66 YARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEF 130
            |||||||.:|||||:|||||||::|||||||||||||||:|||:||:.|:|.:|.|..||.|:|:
  Rat    66 YARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGDEY 130

  Fly   131 NVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVH 195
            |||.:|..||||.|:||.||||||||.:||||:||||||||:||||.||||||.:|:|.|||:||
  Rat   131 NVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195

  Fly   196 RAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKS 260
            |.||.||:||||||.|.||||:::|:|||:|||..:..|.:|::|||||.|||.:|.::...|:.
  Rat   196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKRE 260

  Fly   261 SAVTKKRWNAKKLTNEQRKTKIAAHKAAYVAKLQSETEA 299
              |.|||||..|::..|:|.::|..||:::...:...|:
  Rat   261 --VKKKRWNRPKMSLAQKKDRVAQKKASFLRAQERAAES 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL5NP_001036387.1 PTZ00069 1..298 CDD:240254 197/296 (67%)
Rpl5NP_112361.1 PTZ00069 1..295 CDD:240254 197/295 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..297 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340988
Domainoid 1 1.000 272 1.000 Domainoid score I1732
eggNOG 1 0.900 - - E1_COG0256
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110649
Inparanoid 1 1.050 422 1.000 Inparanoid score I1723
OMA 1 1.010 - - QHG53582
OrthoDB 1 1.010 - - D405247at33208
OrthoFinder 1 1.000 - - FOG0002632
OrthoInspector 1 1.000 - - otm46159
orthoMCL 1 0.900 - - OOG6_100789
Panther 1 1.100 - - LDO PTHR23410
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1734
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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