DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL5 and rpl5a

DIOPT Version :9

Sequence 1:NP_001036387.1 Gene:RpL5 / 3355124 FlyBaseID:FBgn0064225 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_956050.1 Gene:rpl5a / 326961 ZFINID:ZDB-GENE-030131-5161 Length:297 Species:Danio rerio


Alignment Length:290 Identity:199/290 - (68%)
Similarity:237/290 - (81%) Gaps:2/290 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIA 65
            ||||||||||.||:||||||||||||||||:|||||..||||||||||||:|:|.||:||..|||
Zfish     1 MGFVKVVKNKSYFRRYQVKFRRRREGKTDYFARKRLVIQDKNKYNTPKYRMIIRFSNRDIVCQIA 65

  Fly    66 YARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEF 130
            ||:||||.:||||||||||||||..||||||||||||||.|||:|||.|||.:|.|..||||:||
Zfish    66 YAKIEGDAIVCAAYSHELPKYGIACGLTNYAAAYCTGLLCARRLLNKFGLDKVYEGQVEVTGDEF 130

  Fly   131 NVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVH 195
            |||.:|..||||.|:||.||.|||||.:||||:||||||||:||||.||||||.:|:|.|||:||
Zfish   131 NVESIDGQPGAFSCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195

  Fly   196 RAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKS 260
            |.||.|.:|::||..|.|||||.:|:||||:||.|:..:.:|::|||||.:||.:|.|:...|:.
Zfish   196 RKHILGLNVSEYMSLLMEEDEELYKKQFSRFIKNGVTPESIEEMYKKAHASIRENPVHERKPKRE 260

  Fly   261 SAVTKKRWNAKKLTNEQRKTKIAAHKAAYV 290
              |.|||||..|||..|||.::|..||:::
Zfish   261 --VKKKRWNRAKLTLAQRKDRVAQKKASFL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL5NP_001036387.1 PTZ00069 1..298 CDD:240254 199/290 (69%)
rpl5aNP_956050.1 PTZ00069 1..295 CDD:240254 199/290 (69%)
Ribosomal_L18p 26..173 CDD:279233 112/146 (77%)
Ribosomal_L18_c 192..282 CDD:290906 47/91 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580872
Domainoid 1 1.000 277 1.000 Domainoid score I1695
eggNOG 1 0.900 - - E1_COG0256
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110649
Inparanoid 1 1.050 434 1.000 Inparanoid score I1667
OMA 1 1.010 - - QHG53582
OrthoDB 1 1.010 - - D405247at33208
OrthoFinder 1 1.000 - - FOG0002632
OrthoInspector 1 1.000 - - otm25383
orthoMCL 1 0.900 - - OOG6_100789
Panther 1 1.100 - - O PTHR23410
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1734
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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